Resources
Database Credentialed Access
DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries
Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang
Published: April 12, 2022. Version: 1.0.0
Database Credentialed Access
EHRCon: Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records
Yeonsu Kwon, Jiho Kim, Gyubok Lee, Seongsu Bae, Daeun Kyung, Wonchul Cha, Tom Pollard, Alistair Johnson, Edward Choi
Published: March 19, 2025. Version: 1.0.1
Database Credentialed Access
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering chest x-ray benchmark evaluation multi-modal question answering ehr question answering semantic parsing machine learning deep learning electronic health records visual question answering
Published: July 23, 2024. Version: 1.0.0
Database Credentialed Access
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering chest x-ray benchmark evaluation multi-modal question answering ehr question answering semantic parsing machine learning deep learning electronic health records visual question answering
Published: July 23, 2024. Version: 1.0.0
Model Credentialed Access
Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research
Kenneth Kehl, Pavel Trukhanov, Christopher Fong, Justin Jee, Karl Pichotta, Morgan Paul, Chelsea Nichols, Michele Waters, Nikolaus Schultz, Deborah Schrag
Published: Oct. 24, 2024. Version: 1.0.0
Challenge Credentialed Access
ArchEHR-QA: BioNLP at ACL 2025 Shared Task on Grounded Electronic Health Record Question Answering
Sarvesh Soni, Dina Demner-Fushman
electronic health record question answering clinicians patient portals
Published: April 11, 2025. Version: 1.2
Database Credentialed Access
AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph
Lizhou Fan, Huizi Yu
Published: April 15, 2025. Version: 1.0.0
Challenge Credentialed Access
ArchEHR-QA: BioNLP at ACL 2025 Shared Task on Grounded Electronic Health Record Question Answering
Sarvesh Soni, Dina Demner-Fushman
electronic health record question answering clinicians patient portals
Published: April 11, 2025. Version: 1.2
Database Contributor Review
CARMEN-I: A resource of anonymized electronic health records in Spanish and Catalan for training and testing NLP tools
Eulalia Farre Maduell, Salvador Lima-Lopez, Santiago Andres Frid, Artur Conesa, Elisa Asensio, Antonio Lopez-Rueda, Helena Arino, Elena Calvo, Maria Jesús Bertran, Maria Angeles Marcos, Montserrat Nofre Maiz, Laura Tañá Velasco, Antonia Marti, Ricardo Farreres, Xavier Pastor, Xavier Borrat Frigola, Martin Krallinger
de-identification clinical ner anonymization
Published: April 20, 2024. Version: 1.0.1
Database Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour
artificial intelligence clinical notes natural language processing large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation
Published: April 9, 2025. Version: 1.0.0