Resources
Model Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
Eric Lehman, Sarthak Jain, Karl Pichotta, Yoav Goldberg, Byron Wallace
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
AMR-UTI: Antimicrobial Resistance in Urinary Tract Infections
Michael Oberst, Soorajnath Boominathan, Helen Zhou, Sanjat Kanjilal, David Sontag
antibiotic resistance causal inference policy learning antimicrobial resistance urinary tract infection clinical decision support machine learning
Published: Nov. 4, 2020. Version: 1.0.0
Database Credentialed Access
MIMIC-III - SequenceExamples for TensorFlow modeling
Jonas Kemp, Kun Zhang, Andrew Dai
tensorflow sequence modeling machine learning deep learning
Published: Sept. 29, 2020. Version: 1.0.0
Database Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt
patient classification natural language processing
Published: March 5, 2020. Version: 1.20.03
Model Credentialed Access
What's in a Note? Unpacking Predictive Value in Clinical Note Representations
Tristan Naumann, William Boag
Published: Jan. 7, 2018. Version: 0.1
Database Open Access
Clinical data from the MIMIC-II database for a case study on indwelling arterial catheters
Jesse Raffa
Published: Oct. 28, 2016. Version: 1.0
Software Open Access
De-Identification Software Package
The deid
software package includes code and dictionaries for automated location and removal of protected health information (PHI) in free text from medical records.
phi anonymization deidentification
Published: Dec. 18, 2007. Version: 1.1
Database Credentialed Access
MIMIC-IV-ED
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Leo Anthony Celi, Roger Mark, Steven Horng
mimic emergency department ed emergency mimic-iv electronic health record
Published: Jan. 5, 2023. Version: 2.2
Database Restricted Access
Hospitalized patients with heart failure: integrating electronic healthcare records and external outcome data
Zhongheng Zhang, Linghong Cao, Yan Zhao, Ziyin Xu, Rangui Chen, Lukai Lv, Ping Xu
heart failure china electronic health record
Published: May 22, 2022. Version: 1.3
Database Open Access
MIMIC Database
The MIMIC Database includes data recorded from over 90 ICU patients. The data in each case include signals and periodic measurements obtained from a bedside monitor as well as clinical data obtained from the patient's medical record. The recordi…
health record ehr icu mimic critical care
Published: March 15, 2000. Version: 1.0.0
Visualize waveforms