Resources


Database Contributor Review

BRATECA (Brazilian Tertiary Care Dataset): a Clinical Information Dataset for the Portuguese Language

Henrique Dias, Ana Helena Dias Pereira dos Ulbrich

Brazilian clinical dataset containing over 70,000 admissions from 10 hospitals in two Brazilian states.

prescriptions exams tertiary care natural language processing clinical notes

Published: July 14, 2022. Version: 1.1

Database Credentialed Access

MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

Philip Chung, Akshay Swaminathan, Alex Goodell, et al.

A clinician-labeled dataset for fact-checking long-form clinical text against patient EHRs. The dataset contains LLM-written and human-written Brief Hospital Course summaries decomposed to atomic claim and sentence propositions with annotations.

artificial intelligence natural language processing clinical notes electronic health records large language models brief hospital course long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation

Published: April 9, 2025. Version: 1.0.0

Database Contributor Review

Chest Computed Tomography for patients with sepsis in the Emergency Department

Senjun Jin, Zhongheng Zhang

The database is intended to support a wide array of research studies involving radiomics in sepsis patients, helping to reduce barriers to the reproducibility of clinical research.

sepsis

Published: Oct. 28, 2024. Version: 1.0.0

Database Open Access

Myocardial perfusion scintigraphy image database

Wesley Calixto, Solange Nogueira, Fernanda Luz, et al.

This database provides a collection of myocardial perfusion scintigraphy images. The dataset encompasses a diversity of clinical cases, including various perfusion patterns and underlying cardiac conditions.

nifti artificial intelligence anonymization clinical diagnosis myocardial perfusion systems modeling myocardial perfusion scintigraphy dicom metadata ventricular walls coronary artery disease convolutional neural networks automated segmentation

Published: Sept. 9, 2025. Version: 1.0.0

Database Credentialed Access

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts, et al.

DrugEHRQA is a QA dataset containing question-answers from MIMIC-III tables and discharge summaries.

question-answer qa

Published: April 12, 2022. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-MDS-ED: Multimodal Decision Support in the Emergency Department - a Benchmark Dataset for Diagnoses and Deterioration Prediction in Emergency Medicine

Juan Miguel Lopez Alcaraz, Nils Strodthoff

MIMIC-IV-ext-MDS-ED proposes a dataset to benchmark multimodal decision support in the emergency department. It features multimodal input (including ECG waveforms) and a comprehensive set of prediction targets (diagnoses and deterioration prediction)

emergency department ecg diagnoses prediction deterioration prediction benchmark multimodal

Published: Sept. 12, 2024. Version: 1.0.0

Database Credentialed Access

Phenotype Annotations for Patient Notes in the MIMIC-III Database

Edward Moseley, Leo Anthony Celi, Joy Wu, et al.

Clinical notes, annotated by at least two expert annotators for over ten patient phenotypes, including advanced cancer, substance abuse, and treatment non-adherence.

patient classification natural language processing

Published: March 5, 2020. Version: 1.20.03

Database Restricted Access

Community-Acquired Pneumonia, Endotypes and Phenotypes (NACef): Prospective, observational cohort study of Translational Medicine

Natalia Sanabria-Herrera, Esteban Garcia Gallo, Luis Felipe Reyes

Community-Acquired Pneumonia (CAP) poses a significant health risk, linked to high in-hospital morbidity and mortality rates. The dataset includes clinical details of 768 CAP patients at Clinica Universidad de La Sabana, Colombia.

Published: Aug. 21, 2025. Version: 2.0.1

Database Credentialed Access

FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark

Mingjie Li, Wenjia Cai, Rui Liu, et al.

Benchmark dataset for report generation based on fundus fluorescein angiography images and reports.

fundus fluorescein angiography medical report generation vision and language explainable and reliable evaluation

Published: Jan. 21, 2025. Version: 1.1.0

Database Open Access

Myocardial perfusion scintigraphy image database

Wesley Calixto, Solange Nogueira, Fernanda Luz, et al.

This database provides a collection of myocardial perfusion scintigraphy images. The dataset encompasses a diversity of clinical cases, including various perfusion patterns and underlying cardiac conditions.

nifti artificial intelligence anonymization clinical diagnosis myocardial perfusion systems modeling myocardial perfusion scintigraphy dicom metadata ventricular walls coronary artery disease convolutional neural networks automated segmentation

Published: Sept. 9, 2025. Version: 1.0.0