Resources


Database Credentialed Access

RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports

Sarvesh Soni, Kirk Roberts

RadQA is an electronic health record question answering dataset containing clinical questions that can be answered using the Findings and Impressions sections of radiology reports

electronic health records question answering radiology reports machine reading comprehension clinical notes

Published: Dec. 9, 2022. Version: 1.0.0

Database Open Access

Gesture Recognition and Biometrics ElectroMyogram (GRABMyo)

Ning Jiang, Ashirbad Pradhan, Jiayuan He

Open-access dataset of electromyogram (EMG) recordings collected from the wrist and forearm muscles of 43 people while they performed hand gestures.

Published: Dec. 2, 2022. Version: 1.0.2

Visualize waveforms

Database Credentialed Access

CXR-PRO: MIMIC-CXR with Prior References Omitted

Vignav Ramesh, Nathan Chi, Pranav Rajpurkar

CXR-PRO is an adaptation of the MIMIC-CXR dataset (consisting of chest radiographs and their associated free-text radiology reports) with references to non-existent priors removed.

generation large language models free-text radiology reports references to priors retrieval

Published: Nov. 23, 2022. Version: 1.0.0

Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, Wojciech Samek, Tobias Schaeffter

The PTB-XL ECG dataset is a large dataset of 21801 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw signal data has been annotated by up to two cardiologists with 71 different ECG statements and is supplemented by rich metadata.

ptb-xl ptb electrocardiography ecg

Published: Nov. 9, 2022. Version: 1.0.3

Visualize waveforms

Database Credentialed Access

GLOBEM Dataset: Multi-Year Datasets for Longitudinal Human Behavior Modeling Generalization

Xuhai Xu, Han Zhang, Yasaman Sefidgar, Yiyi Ren, Xin Liu, Woosuk Seo, Jennifer Brown, Kevin Kuehn, Mike Merrill, Paula Nurius, Shwetak Patel, Tim Althoff, Margaret Morris, Eve Riskin, Jennifer Mankoff, Anind Dey

GLOBEM datasets contain the first released multi-year mobile and wearable sensing datasets from 2018 to 2021, containing 705 person-years and 497 unique participants.

health ubiquitous computing passive mobile sensing human behavior modeling well-being

Published: Nov. 4, 2022. Version: 1.0

Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar

We introduce a hierarchical annotation suite of tasks addressing clinical text understanding, reasoning and abstraction over evidence, and diagnosis summarization. One task is section tagging major section and the other task is diagnosis generation.

Published: Sept. 30, 2022. Version: 1.0.0

Database Open Access

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

Hyung-Chul Lee, Chul-Woo Jung

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

waveform anesthesia vitaldb intraoperative biosignal ecg

Published: Sept. 21, 2022. Version: 1.0.0

Database Credentialed Access

MIMIC-III Clinical Database CareVue subset

Alistair Johnson, Tom Pollard, Roger Mark

A subset of the MIMIC-III Clinical Database containing only patients admitted from 2001 - 2008.

Published: Sept. 21, 2022. Version: 1.4

Database Open Access

BIG IDEAs Lab Glycemic Variability and Wearable Device Data

Peter Cho, Juseong Kim, Brinnae Bent, Jessilyn Dunn

Glucose measurements and wrist-worn wearable sensor data from highnormoglycemic participants.

biomedical engineering pre-diabetes biomarkers

Published: Sept. 15, 2022. Version: 1.0.0

Database Open Access

Indian Institute of Science Fetal Heart Sound Database (IIScFHSDB)

Amrutha Bhaskaran, Manish Arora

The IIScFHSDB has 60 fetal phonocardiography recordings obtained in a hospital setting with the objective to provide fPCG recordings with clinical noise settings for development of signal processing algorithms for FHR determination and denoising fPCG

1 fetal heart sound 2 fhr

Published: Sept. 15, 2022. Version: 1.0