Resources


Database Credentialed Access

SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia

Nikolay Markov, Catherine A Gao, Thomas Stoeger, Anna Pawlowski, Mengjia Kang, Prasanth Nannapaneni, Rogan Grant, Luke Rasmussen, Daniel Schneider, Justin Starren, Richard Wunderink, GR Scott Budinger, Alexander Misharin, Benjamin Singer, NU SCRIPT Study Investigators

SCRIPT seeks to delineate the host/pathogen interactions during pneumonia using multiomic analysis of bronchoalveolar lavage fluid joined with clinical data and physician adjudication.

Published: March 13, 2023. Version: 1.1.0


Database Credentialed Access

A Brazilian Multilabel Ophthalmological Dataset (BRSET)

Luis Filipe Nakayama, Mariana Goncalves, Lucas Zago Ribeiro, Helen Santos, Daniel Ferraz, Fernando Malerbi, Leo Anthony Celi, Caio Regatieri

This is the first Brazilian Multilabel Ophthalmological Dataset with demographic information and retinal photos labeled images according to anatomical parameters, quality control, and presumed diagnosis.

dataset ophthalmology retina

Published: March 8, 2023. Version: 1.0.0


Database Credentialed Access

Generalized Image Embeddings for the MIMIC Chest X-Ray dataset

Andrew Sellergren, Atilla Kiraly, Tom Pollard, Wei-Hung Weng, Yun Liu, Akib Uddin, Christina Chen

This database contains compact information-rich embeddings of the MIMIC-CXR Database v2.0.0 using the CXR Foundation API v1.0.

Published: Feb. 22, 2023. Version: 1.0


Database Open Access

In-Gauge and En-Gage: Understanding Occupants' Behaviour, Engagement, Emotion, and Comfort Indoors with Heterogeneous Sensors and Wearables

Nan Gao, Max Marschall, Jane Burry, Simon Watkins, Flora Salim

The project aims to understand occupants’ behaviour, engagement, emotion, and comfort indoors with heterogeneous sensors and wearables.

electrodermal activity heart rate physiological signals environmental sensing thermal comfort modelling occupant behaviour sensing emotion sensing human behavoural modelling smart building

Published: Feb. 13, 2023. Version: 1.0.0


Database Credentialed Access

Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries

Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi

The database contains a corpus of annotated data from the MIMIC-III Critical Care Database from a study that aimed to develop and apply an annotation schema to characterize opioid use disorder and related contextual factors.

natural language processing clinical notes opioid use disorder substance use

Published: Feb. 8, 2023. Version: 1.0.0


Database Credentialed Access

Chest X-ray Dataset with Lung Segmentation

Wimukthi Indeewara, Mahela Hennayake, Kasun Rathnayake, Thanuja Ambegoda, Dulani Meedeniya

CXLSeg dataset: Chest X-ray with Lung Segmentation, a comparatively large dataset of segmented Chest X-ray radiographs based on the MIMIC-CXR dataset. This contains segmentation results of 243,324 frontal view images and corresponding masks.

segmentation chest x-ray medical reports u-net chest radiographs mimic-cxr

Published: Feb. 8, 2023. Version: 1.0.0


Database Open Access

MIMIC-IV-ED Demo

Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Leo Anthony Celi, Steven Horng, Roger Mark

An openly available subset of the MIMIC-IV-ED database

mimic emergency department

Published: Feb. 8, 2023. Version: 2.2


Database Open Access

MIMIC-IV Clinical Database Demo

Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark

An openly available subset of patients in the MIMIC-IV database.

mimic critical care electronic health record

Published: Jan. 31, 2023. Version: 2.2


Database Open Access

Pressure, flow, and dynamic thoraco-abdominal circumferences data for adults breathing under CPAP therapy

Ella Frances Sophia Guy, Jennifer Knopp, Theodore Lerios, James Geoffrey Chase

Dataset of pressure, flow, and dynamic abdominal and chest circumference for healthy people breathing with CPAP. Data was collected with PEEP settings of 0 (ZEEP), 4, and 8cmH2O at normal/resting, panting/short and deep/long breath patterns/rates.

Published: Jan. 25, 2023. Version: 1.0.0


Database Credentialed Access

Establishment of a Chinese critical care database from electronic healthcare records in a tertiary care medical center

Senjun Jin, Lin Chen, Kun Chen, Zhongheng Zhang

Chinese critical care database from electronic healthcare records in a tertiary care medical center

critical care database china

Published: Jan. 19, 2023. Version: 1.0