Resources


Database Open Access

Minute level step counts and physical activity data from the National Health and Nutrition Examination Survey (NHANES) 2011-2014

Lily Koffman, John Muschelli

Minute level step counts obtained from five step counting algorithms for raw accelerometry data, and minute level Activity Counts, MIMS, wear predictions, and wear flags for all participants who wore accelerometers in NHANES 2011-2014.

accelerometry physical activity steps nhanes

Published: May 5, 2025. Version: 1.0.1

Database Credentialed Access

Bridge2AI-Voice: An ethically-sourced, diverse voice dataset linked to health information

Yael Bensoussan, Alexandros Sigaras, Anais Rameau, Olivier Elemento, Maria Powell, David Dorr, Philip Payne, Vardit Ravitsky, Jean-Christophe Bélisle-Pipon, Alistair Johnson, Ruth Bahr, Stephanie Watts, Donald Bolser, Jennifer Siu, Jordan Lerner-Ellis, Frank Rudzicz, Micah Boyer, Samantha Salvi Cruz, Yassmeen Abdel-Aty, Toufeeq Ahmed Syed, James Anibal, Stephen Aradi, Ana Sophia Martinez, Shaheen Awan, Steven Bedrick, Isaac Bevers, Rahul Brito, Selina Casalino, John Costello, Iris De Santiago, Enrique Diaz-Ocampo, Mohamed Ebraheem, Ellie Eiseman, Mahmoud Elmahdy, Emily Evangelista, Kenneth Fletcher, Alexander Gelbard, Anna Goldenberg, Karim Hanna, William Hersh, Lochana Jayachandran, Kaley Jenney, Kathy Jenkins, Stacy Jo, Ayush Kalia, Andrea Krussel, Elisa Lapadula, Chloe Loewith, Radhika Mahajan, Vrishni Maharaj, Siyu Miao, Matthew Mifsud, Marian Mikhael, Elijah Moothedan, Yosef Nafii, Tempestt Neal, Karlee Newberry, Evan Ng, Christopher Nickel, Trevor Pharr, Claire Premi-Bortolotto, JM Rahman, Sarah Rohde, Laurie Russell, Suketu Shah, Ahmed Shawkat, Elizabeth Silberholz, Duncan Sutherland, Venkata Swarna Mukhi, Jeffrey Tang, Jamie Toghranegar, Kimberly Vinson, Claire Wilson, Madeleine Zanin, Xijie Zeng, Theresa Zesiewicz, Robin Zhao, Pantelis Zisimopoulos, Satrajit Ghosh

A dataset of features from voice recordings and metadata to enable the development, benchmarking, and validation of clinically applicable machine-learning models for diagnosing a wide range of health conditions.

voice bridge2ai

Published: April 16, 2025. Version: 2.0.0

Database Credentialed Access

Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database

Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman

Annotation dataset of social determinants of health from MIMC-III Clinical Care Database notes.

natural language processing social determinants of health

Published: Jan. 24, 2024. Version: 1.0.1

Model Credentialed Access

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Kenneth Kehl, Pavel Trukhanov, Christopher Fong, Justin Jee, Karl Pichotta, Morgan Paul, Chelsea Nichols, Michele Waters, Nikolaus Schultz, Deborah Schrag

The DFCI-imaging-student and DFCI-medonc-student AI models for extracting cancer outcomes from imaging reports and medical oncologist notes from electronic health records.

Published: Oct. 24, 2024. Version: 1.0.0

Database Restricted Access

Organ Retrieval and Collection of Health Information for Donation (ORCHID)

Hammaad Adam, Vinith Suriyakumar, Tom Pollard, Benjamin Moody, Jennifer Erickson, Greg Segal, Brad Adams, Diane Brockmeier, Kevin Lee, Ginny McBride, Kelly Ranum, Matthew Wadsworth, Janice Whaley, Ashia Wilson, Marzyeh Ghassemi

Multi-center dataset on organ procurement in the United States

organ procurement organizations organ transplantation

Published: June 27, 2024. Version: 2.0.0

Database Open Access

A Multi-Modal Satellite Imagery Dataset for Public Health Analysis in Colombia

Sebastian A Cajas, David Restrepo, Dana Moukheiber, Kuan Ting Kuo, Chenwei Wu, David Santiago Garcia Chicangana, Atika Rahman Paddo, Mira Moukheiber, Lama Moukheiber, Sulaiman Moukheiber, Saptarshi Purkayastha, Diego M Lopez, Po-Chih Kuo, Leo Anthony Celi

Multi-Modal Satellite imagery Dataset in Colombia: A public health analysis with spatiotemporally aligned satellite images and its corresponding metadata across 81 municipalities (2016-2018), facilitating multimodal AI applications.

multimodality satellite imagery

Published: Jan. 30, 2024. Version: 1.0.0

Database Credentialed Access

Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database

Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman

Annotation dataset of social determinants of health from MIMC-III Clinical Care Database notes.

natural language processing social determinants of health

Published: Jan. 24, 2024. Version: 1.0.1

Database Credentialed Access

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts, Daisy Zhe Wang

DrugEHRQA is a QA dataset containing question-answers from MIMIC-III tables and discharge summaries.

question-answer qa

Published: April 12, 2022. Version: 1.0.0

Database Credentialed Access

Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project

Nicholas Kuo, Simon Finfer, Louisa Jorm, Sebastiano Barbieri

This repository hosts the original Health Gym datasets of Acute Hypotension and Sepsis

sepsis acute hypotension synthetic dataset generative modelling wasserstein generative adversarial network reinforcement learning machine learning

Published: Feb. 23, 2022. Version: 1.0.0

Database Credentialed Access

National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database

Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li

A dataset of annotated NIHSS scale items and corresponding scores from stroke patients discharge summaries in MIMIC-III.

Published: Jan. 25, 2021. Version: 1.0.0