Resources
Database Credentialed Access
AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph
Lizhou Fan, Huizi Yu
Published: April 15, 2025. Version: 1.0.0
Database Credentialed Access
Chest ImaGenome Dataset
Joy Wu, Nkechinyere Agu, Ismini Lourentzou, Arjun Sharma, Joseph Paguio, Jasper Seth Yao, Edward Christopher Dee, William Mitchell, Satyananda Kashyap, Andrea Giovannini, Leo Anthony Celi, Tanveer Syeda-Mahmood, Mehdi Moradi
scene graph visual dialogue object detection semantic reasoning bounding box knowledge graph explainability reasoning relation extraction chest disease progression cxr chest x-ray machine learning radiology deep learning multimodal visual question answering
Published: July 13, 2021. Version: 1.0.0
Database Credentialed Access
Chest ImaGenome Dataset
Joy Wu, Nkechinyere Agu, Ismini Lourentzou, Arjun Sharma, Joseph Paguio, Jasper Seth Yao, Edward Christopher Dee, William Mitchell, Satyananda Kashyap, Andrea Giovannini, Leo Anthony Celi, Tanveer Syeda-Mahmood, Mehdi Moradi
scene graph visual dialogue object detection semantic reasoning bounding box knowledge graph explainability reasoning relation extraction chest disease progression cxr chest x-ray machine learning radiology deep learning multimodal visual question answering
Published: July 13, 2021. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights
Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint
mimic process mining multi entity process mining object centric event log clinical event knowledge graph
Published: April 8, 2025. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights
Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint
mimic process mining multi entity process mining object centric event log clinical event knowledge graph
Published: April 8, 2025. Version: 1.0.0
Database Open Access
Synthetic Mention Corpora for Disease Entity Recognition and Normalization
Kuleen Sasse, John David Osborne
nlp named entity recognition machine learning data augmentation entity normalization
Published: Feb. 3, 2025. Version: 1.0.0
Database Credentialed Access
RadGraph2: Tracking Findings Over Time in Radiology Reports
Adam Dejl, Sameer Khanna, Patricia Therese Pile, Kibo Yoon, Steven QH Truong, Hanh Duong, Agustina Saenz, Pranav Rajpurkar
chest x-rays relation extraction disease progression information extraction radiology reports named entity recognition
Published: Aug. 8, 2024. Version: 1.0.0
Software Open Access
Data Chromatix
Analysis of biomedical time series plays a key role in clinical management and basic investigation. However, most conventional monitors streaming data in real-time show only the most recent values, not referenced to past dynamics. The proposed visua…
Published: Nov. 9, 2015. Version: 1.0.0
Database Credentialed Access
RadGraph: Extracting Clinical Entities and Relations from Radiology Reports
Saahil Jain, Ashwin Agrawal, Adriel Saporta, Steven QH Truong, Du Nguyen Duong, Tan Bui, Pierre Chambon, Matthew Lungren, Andrew Ng, Curtis Langlotz, Pranav Rajpurkar
entity and relation extraction graph multi-modal natural language processing radiology
Published: June 3, 2021. Version: 1.0.0
Database Credentialed Access
RadGraph: Extracting Clinical Entities and Relations from Radiology Reports
Saahil Jain, Ashwin Agrawal, Adriel Saporta, Steven QH Truong, Du Nguyen Duong, Tan Bui, Pierre Chambon, Matthew Lungren, Andrew Ng, Curtis Langlotz, Pranav Rajpurkar
entity and relation extraction graph multi-modal natural language processing radiology
Published: June 3, 2021. Version: 1.0.0