Resources
26 results for "biomedical"
Database
Credentialed Access
MS-CXR-T: Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing
MS-CXR-T is a multi-modal benchmark dataset for evaluating biomedical vision-language processing (VLP) models on two distinct temporal tasks in radiology: image classification and sentence similarity. The former comprises multi-image frontal chest X…
Database
Credentialed Access
MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing
We release a new dataset, MS-CXR, with locally-aligned phrase grounding annotations by board-certified radiologists to facilitate the study of complex semantic modelling in biomedical vision–language processing. The MS-CXR dataset provides 1162 imag…
Database
Open Access
Synthetic Mention Corpora for Disease Entity Recognition and Normalization
Named Entity Recognition (NER) and Entity Normalization (EN) are fundamental tasks in information extraction, particularly in the biomedical and clinical domains. NER identifies textual mentions of entities, while EN maps these mentions to unique id…
Software
Open Access
FECGSYN Toolbox
The FECGSYN toolbox is a reference open-source platform for NI-FECG research, product of a collaboration between the Department of Engineering Science, University of Oxford (DES-OX), the Institute of Biomedical Engineering, TU Dresden (IBMT-TUD) and…
Software
Open Access
augsig: A Python Package for Physiological Signal Augmentation
The augsig package is a modular and extensible Python library for physiological signal augmentation. It provides a set of physiologically consistent augmentation methods for biomedical signals, designed to enhance data diversity, improve generalizat…
Database
Credentialed Access
MeDiSumQA: Patient-Oriented Question-Answer Generation from Discharge Letters
While increasing patients' access to medical documents improves medical care, this benefit is limited by varying health literacy levels and complex medical terminology. Large language models (LLMs) offer solutions by simplifying medical information.…
Database
Credentialed Access
CovIdentify Dataset
This dataset supports the study "A method for intelligent allocation of diagnostic testing by leveraging data from commercial wearable devices: a case study on COVID-19," which developed an Intelligent Testing Allocation (ITA) method. The study demo…
Database
Open Access
Brno University of Technology Smartphone PPG Database (BUT PPG)
Brno University of Technology Smartphone PPG Database (BUT PPG) is a database created by the cardiology team at the Department of Biomedical Engineering, Brno University of Technology, for the purpose of evaluating PPG quality and estimation of hear…
Model
Credentialed Access
Me-LLaMA: Foundation Large Language Models for Medical Applications
Recent advancements in large language models (LLMs) such as ChatGPT and LLaMA have hinted at their potential to revolutionize medical applications, yet their application in clinical settings often reveals limitations due to a lack of specialized tra…
Model
Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synth…