Resources
Database Credentialed Access
Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database
Marco Guevara, Shan Chen, Spencer Thomas, Danielle Bitterman
natural language processing social determinants of health
Published: Jan. 24, 2024. Version: 1.0.1
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
opioid use disorder substance use clinical notes natural language processing
Published: Feb. 8, 2023. Version: 1.0.0
Software Open Access
PhysioTag: An Open-Source Platform for Collaborative Annotation of Physiological Waveforms
Lucas McCullum, Benjamin Moody, Hasan Saeed, Tom Pollard, Xavier Borrat Frigola, Li-wei Lehman, Roger Mark
Published: April 25, 2023. Version: 1.0.0
Database Restricted Access
VinDr-SpineXR: A large annotated medical image dataset for spinal lesions detection and classification from radiographs
Hieu Huy Pham, Hieu Nguyen Trung, Ha Quy Nguyen
Published: Aug. 24, 2021. Version: 1.0.0
Database Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li
Published: Jan. 25, 2021. Version: 1.0.0
Database Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt
patient classification natural language processing
Published: March 5, 2020. Version: 1.20.03
Database Open Access
Brno University of Technology ECG Signal Database with Annotations of P Wave (BUT PDB)
Lucie Maršánová, Andrea Nemcova, Radovan Smisek, Lukas Smital, Martin Vitek
Published: Jan. 19, 2021. Version: 1.0.0
Visualize waveformsDatabase Credentialed Access
Medical Expert Annotations of Unsupported Facts in Doctor-Written and LLM-Generated Patient Summaries
Stefan Hegselmann, Shannon Shen, Florian Gierse, Monica Agrawal, David Sontag, Xiaoyi Jiang
Published: April 28, 2024. Version: 1.0.0
Database Credentialed Access
Annotated Question-Answer Pairs for Clinical Notes in the MIMIC-III Database
Xiang Yue, Xinliang Frederick Zhang, Huan Sun
clinical question answering clinical nlp clinical reading comprehension
Published: Jan. 15, 2021. Version: 1.0.0
Database Credentialed Access
CAD-Chest: Comprehensive Annotation of Diseases based on MIMIC-CXR Radiology Report
Mengliang Zhang, Xinyue Hu, Lin Gu, Tatsuya Harada, Kazuma Kobayashi, Ronald Summers, Yingying Zhu
Published: Dec. 8, 2023. Version: 1.0