Resources
160 results for "mimic"
Database
Credentialed Access
MIMIC-III Clinical Database
MIMIC-III is a large, freely-available database comprising deidentified health-related data associated with over forty thousand patients who stayed in critical care units of the Beth Israel Deaconess Medical Center between 2001 and 2012. The databas…
Database
Credentialed Access
MIMIC-II Clinical Database
MIMIC-II documents a diverse and large population of intensive care unit patient stays and contains comprehensive and detailed clinical data, including physiological waveforms and minute-by-minute trends for a subset of records. It establishes a uni…
Database
Credentialed Access
MIMIC-IV-Ext Gender-Expansive Patient Stigmatizing Language Annotations
This database supports research on stigmatizing language in clinical documentation concerning gender-expansive patients. It contains expert-reviewed, note-level annotations for 754 deidentified discharge summaries from MIMIC-IV-Note, including 366 n…
Database
Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
The VeriFact-BHC dataset is designed to verify the factuality of long-form text written about a patient against their own electronic health record. There is increasing interest in using large language models (LLMs) to generate clinical text in patie…
natural language processing
clinical informatics
formal logic
chart review
text embedding
brief hospital course
long-form text
logical atomism
retrieval-augmented generation
text reranking
clinical medicine
atomic claim
fact verification
hybrid retrieval
llm-as-a-judge
llm evaluation
clinical notes
large language models
electronic health records
artificial intelligence
Database
Credentialed Access
MIMIC-IV-Ext-PE: Pulmonary Embolism Labels for CT Pulmonary Angiography Radiology Reports
Pulmonary embolism (PE) is a leading cause of preventable in-hospital mortality. Advances in diagnosis, risk stratification, and prevention can improve outcomes. Large, publicly available datasets are needed to move research forward but are lacking …
Database
Credentialed Access
MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction
Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…
Database
Credentialed Access
MIMIC-IV-ECHO-Ext-MIMICEchoQA: A Benchmark Dataset for Echocardiogram-Based Visual Question Answering
We present MIMICEchoQA, a benchmark dataset for echocardiogram-based question answering, built from the publicly available MIMIC-IV-ECHO database. Each echocardiographic study was paired with the closest discharge summary within a 7-day window, and …
Database
Open Access
MIMIC-IV demo data in the Medical Event Data Standard (MEDS)
This dataset is an automated ETL conversion of the MIMIC-IV Clinical Database Demo into the Medical Event Data Standard (MEDS). MEDS is a data schema for storing streams of medical events such as those sourced from Electronic Health Records or claim…
Database
Credentialed Access
MIMIC-Ext-DrugDetection
This project shares a large, annotated drug detection dataset created from MIMIC-III/IV discharge summaries. The dataset was developed to address the challenge of identifying substance use behaviors in Electronic Health Records (EHRs), where critica…
Database
Credentialed Access
Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database
Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…