Resources
Model Credentialed Access
Clinical-T5: Large Language Models Built Using MIMIC Clinical Text
Eric Lehman, Alistair Johnson
Published: Jan. 25, 2023. Version: 1.0.0
Database Credentialed Access
MIMIC-IV-Ext Clinical Decision Making: A MIMIC-IV Derived Dataset for Evaluation of Large Language Models on the Task of Clinical Decision Making for Abdominal Pathologies
Paul Hager, Friederike Jungmann, Daniel Rueckert
clinical decision making abdominal pathologies treatment plan emergency room diagnosis large language models
Published: July 8, 2024. Version: 1.1
Database Credentialed Access
MIMIC-IV-Ext Clinical Decision Making: A MIMIC-IV Derived Dataset for Evaluation of Large Language Models on the Task of Clinical Decision Making for Abdominal Pathologies
Paul Hager, Friederike Jungmann, Daniel Rueckert
clinical decision making abdominal pathologies treatment plan emergency room diagnosis large language models
Published: July 8, 2024. Version: 1.1
Database Credentialed Access
MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization
Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari
clinical notes natural language processing machine learning brief hospital course text summarization
Published: Feb. 3, 2025. Version: 1.2.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes synthetic clinical notes synthetic notes asclepius open-source llm clinical llm large language model
Published: March 25, 2024. Version: 1.1.0
Database Credentialed Access
MIMIC-IV-Ext-BHC: Labeled Clinical Notes Dataset for Hospital Course Summarization
Asad Aali, Dave Van Veen, Yamin Arefeen, Jason Hom, Christian Bluethgen, Eduardo Pontes Reis, Sergios Gatidis, Namuun Clifford, Joseph Daws, Arash Tehrani, Jangwon Kim, Akshay Chaudhari
clinical notes natural language processing machine learning brief hospital course text summarization
Published: Feb. 3, 2025. Version: 1.2.0
Model Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
Sunjun Kweon, Junu Kim, Jiyoun Kim, Sujeong Im, Eunbyeol Cho, Seongsu Bae, Jungwoo Oh, Gyubok Lee, Jong Hak Moon, Seng Chan You, Seungjin Baek, Chang Hoon Han, Yoon Bin Jung, Yohan Jo, Edward Choi
clinical notes synthetic clinical notes synthetic notes asclepius open-source llm clinical llm large language model
Published: March 25, 2024. Version: 1.1.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr pediatrics polysomnography clinical decision support sleep study ecg sleep disorders electronic health records
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr pediatrics polysomnography clinical decision support sleep study ecg sleep disorders electronic health records
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour
artificial intelligence clinical notes natural language processing large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation
Published: April 9, 2025. Version: 1.0.0