Resources
500 resources
Model
Credentialed Access
Fine-tuning foundational models to code diagnoses from veterinary health records
Fine-tuned GatorTron LLM for veterinary diagnosis coding to 7,739 SNOMED-CT codes based on clinical summary text from the Colorado State University Veterinary Teaching Hospital.
Database
Credentialed Access
Lunguage: A Benchmark for Structured and Sequential Chest X-ray Interpretation
A radiologist-annotated benchmark of structured chest X-ray reports at single and sequential levels, comprising 1,473 reports across 18 relation types and 80 longitudinal cases.
fine-grained structured reports
attribute-level clinical reasoning
medical text structuring
longitudinal clinical reasoning
chest x-ray report parsing
medical information structuring
benchmark dataset for radiology report
medical information extraction
structured radiology reports
temporal relation extraction
radiology report benchmarking
longitudinal clinical understanding
Database
Open Access
PSG-IPA: A PolySomnoGraphic Inter-scorer Performance Assessment database
The HMC-IPA dataset comprises 20 PSG recordings, each with manual and computer-assisted scorings by 12 sleep technologists, for studying inter-scorer variability and evaluating automated sleep analysis algorithms
Database
Credentialed Access
MedVH: Towards Systematic Evaluation of Hallucination for Large Vision Language Models in the Medical Context
MedVH provides a visual hallucination evaluation benchmark for large language models in the medical context. It formulates tests using chest X-ray images, including multi-choice question answering and long-text generation tasks.
Database
Restricted Access
Microbiological, Immunological and Biochemical Characteristics of the Development of Ventilator Associated Pneumonia
This study explores the respiratory microbiome's role in nosocomial lower respiratory tract infections in ICU patients. Conducted in Chía, Colombia, revealing the microbiome's impact on disease progression.
Database
Credentialed Access
Antibiotic Resistance Microbiology Dataset Mass General Brigham (ARMD-MGB)
ARMD-MGB contains detailed microbiology and clinical metadata for >225,000 patients and >970,000 cultures collected over 10 years
Database
Credentialed Access
EchoGraph-annotated ECHO-NOTE2NUM examples
EchoGraph is a model that automatically extracts and structures clinical information from echocardiogram reports. The Annotated ECHO-NOTE2NUM Dataset contains MIMIC-III echo reports enhanced with EchoGraph annotations to enhance future research.
Database
Contributor Review
InReDD-Dataset-PAN924
InReDD‑Dataset-V1 is a collection of 924 anonymised panoramic dental radiographs curated by the Interdisciplinary Research Group in Digital Dentistry (InReDD) at the University of São Paulo.
Database
Credentialed Access
MedVAL-Bench: Expert-Annotated Medical Text Validation Benchmark
MedVAL-Bench is the first large-scale physician-validated benchmark for medical text validation, spanning 6 diverse medical tasks and containing 840 language model-generated outputs annotated by 12 physicians with error assessments and risk grades.
Database
Credentialed Access
Predictors of Hospital Onset Infection: A Matched Retrospective Cohort Dataset
NPA-CP is a freely accessible dataset derived from electronic health record (EHR) information at MGB between 2015 and 2024. The dataset includes 11 different pathogens and can be used to predict hospital-onset infections for these pathogens.