Resources


Database Credentialed Access

MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes

Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Michael Holder, Rose Penfold, Alexandra Birch, Beatrice Alex

9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. Focus on low resource codes.

icd coding large language model data augmentation

Published: Dec. 16, 2024. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes

Matúš Falis, Aryo Pradipta Gema, Hang Dong, Luke Daines, Siddharth Basetti, Michael Holder, Rose Penfold, Alexandra Birch, Beatrice Alex

9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. Focus on low resource codes.

icd coding large language model data augmentation

Published: Dec. 16, 2024. Version: 1.0.0

Software Credentialed Access

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

Luis R Soenksen, Yu Ma, Cynthia Zeng, Leonard David Jean Boussioux, Kimberly Villalobos Carballo, Liangyuan Na, Holly Wiberg, Michael Li, Ignacio Fuentes, Dimitris Bertsimas

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

database code multimodality

Published: Aug. 23, 2022. Version: 1.0.1

Software Credentialed Access

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

Luis R Soenksen, Yu Ma, Cynthia Zeng, Leonard David Jean Boussioux, Kimberly Villalobos Carballo, Liangyuan Na, Holly Wiberg, Michael Li, Ignacio Fuentes, Dimitris Bertsimas

Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays

database code multimodality

Published: Aug. 23, 2022. Version: 1.0.1

Model Credentialed Access

Medical AI Research Foundations: A repository of medical foundation models

Shekoofeh Azizi, Jan Freyberg, Laura Culp, Patricia MacWilliams, Sara Mahdavi, Vivek Natarajan, Alan Karthikesalingam

Medical AI Research Foundations is a repository of medical foundation models.

Published: April 25, 2023. Version: 1.0.0

Database Restricted Access

KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology

Hakje Yoo, Yunjin Yum, Soowan Park, Jeong Moon Lee, Moonjoung Jang, Yoojoong Kim, Jong-Ho Kim, Hyun-Joon Park, Kap Su Han, Jae Hyoung Park, Hyung Joon Joo

The KURIAS-ECG database is a high-quality 12-lead ECG DB including standard vocabulary (SNOMED CT, OMOP-CDM), and ECG diagnoses of our DB are grouped into 10 diagnoses by applying the minnesota code.

snomed minnesota 12-lead ecg

Published: Nov. 8, 2021. Version: 1.0

Software Open Access

Gradient Algorithm

In finding an optimal stimulus waveform for inducing switches in neuronal states, analytical techniques from optimal control theory are often found to be difficult to use or extremely time intensive. Here, we present the code for a gradient-based al…

optimization

Published: Aug. 21, 2015. Version: 1.0.0

Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Hannes Ulrich, Joshua Wiedekopf, Piotr Szul, John Grimes, Alistair Johnson

The MIMIC-IV Clinical Database Demo on FHIR is a 100 patient subset of the MIMIC-IV v2.2 and MIMIC-IV-ED v2.2 clinical databases converted into the Fast Healthcare Interoperability Resources (FHIR) format.

fhir electronic health records mimic

Published: Aug. 27, 2025. Version: 2.1.0

Database Credentialed Access

Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database

Vijeeth Guggilla, Melissa Bak, Mengjia Kang, Theresa Walunas, Catherine A Gao

This database contains 200 MIMIC-III admission notes with adjudicated labels for histories of various immunosuppressive conditions and usage of various immunosuppressive medications.

Published: Aug. 4, 2025. Version: 1.0.0

Database Credentialed Access

Annotated Social Determinants of Health Dataset for Adverse Pregnancy Outcomes

Nidhi Soley, MaKhaila Bentil, Jash Shah, Masoud Rouhizadeh, Casey Taylor

This project provides a manually annotated dataset of social determinants of health—social support, occupation, and substance use—linked to pregnancy outcomes, extracted from MIMIC-III and MIMIC-IV discharge summary notes.

Published: Aug. 4, 2025. Version: 1.0.0