Resources
47 results for "code"
Model
Credentialed Access
Fine-tuning foundational models to code diagnoses from veterinary health records
Veterinary medical records represent a large data resource for application to veterinary and One Health clinical research efforts. Use of the data is limited by interoperability challenges including inconsistent data formats and data siloing. Clinic…
Database
Credentialed Access
MIMIC-IV-Ext-GPT-3_5-Generated-Discharge-Summaries-for-Low-Resource-Codes
This dataset comprises 9,606 Synthetic Discharge Summaries generated by GPT-3.5 based on combinations of ICD-10-code descriptions associated with real discharge summaries in MIMIC-IV. As part of the generation process, GPT-3.5 was also tasked to cod…
Database
Credentialed Access
MIMIC-IV-Ext-EntityCoding: Clinical Named Entity Recognition and Assertion Classification Dataset for ICD Coding
This dataset provides clinical Named Entity Recognition (NER) and Assertion Classification (AC) annotations for 400 discharge summaries from MIMIC-IV-Note (v2.2), designed to support research on computer-assisted ICD coding and related clinical natu…
Software
Credentialed Access
Code for generating the HAIM multimodal dataset of MIMIC-IV clinical data and x-rays
A multimodal combination of the MIMIC-IV v1.0.0 and MIMIC Chest X-ray (MIMIC-CXR-JPG) v2.0.0 databases filtered to only include patients that have at least one chest X-ray performed with the goal of validating multi-modal predictive analytics in hea…
Model
Credentialed Access
Medical AI Research Foundations: A repository of medical foundation models
Medical AI Research Foundations is a repository of open-source medical foundation models. With this collection of non-diagnostic models, APIs, and resources like code and data, researchers and developers can accelerate their medical AI research. Thi…
Database
Restricted Access
KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology
The 12-lead electrocardiogram (ECG) is the fundamental test used to evaluate the electrophysiological state of the heart. Most previous ECG databases use the diagnosis confirmed by experts. Therefore, ECG diagnosis is not standardized and its qualit…
Software
Open Access
Gradient Algorithm
In finding an optimal stimulus waveform for inducing switches in neuronal states, analytical techniques from optimal control theory are often found to be difficult to use or extremely time intensive. Here, we present the code for a gradient-based al…
Database
Credentialed Access
MIMIC-IV-Ext-DischargeBench: Dataset for Pre-Deployment Evaluation of LLM Discharge Educators through Patient Simulation
MIMIC-IV-Ext-DischargeBench is a derived dataset of 320 curated hospitalization cases (v1.0.0) built from MIMIC-IV (v3.1) and MIMIC-IV-Note (v2.2). Each case is a structured patient profile drawn from the discharge documentation of a single hospital…
Database
Contributor Review
ELDER-ICU-DB: A Comprehensive Critical Care Data Resource for International Multicenter Study on Elderly ICU Patients
Critically ill elderly patients, characterized by high mortality and complex comorbidities, pose growing challenges to ICUs while consuming substantial healthcare resources. Current clinical research on this vulnerable population predominantly relie…
Database
Credentialed Access
MIMIC-IV-Ext MIMIC Note Extract: A Large-Scale Structured Dataset Extracted from MIMIC-IV-Note Discharge Summaries
MIMIC is one of the most widely used public hospital datasets for machine learning on electronic health records [3], but its structured tables answer many clinical questions only through coded surrogates, or not at all. For example, a patient's past…