Resources


Database Credentialed Access

AIPatient KG: MIMIC-III and CORAL Electronic Health Records based Patient Knowledge Graph

Lizhou Fan, Huizi Yu

This project integrates MIMIC-III and CORAL electronic health records into knowledge graphs to improve medical analysis and enhance decision-making capabilities. Resources include two knowledge graph snapshots and two question-and-answering datasets.

Published: April 15, 2025. Version: 1.0.0

Database Restricted Access

Electrocardiogram-Capable Smartwatches: Assessing Their Clinical Accuracy and Application

Joaquin Recas, Mauro Buelga Suárez, Sergio González-Cabeza, Mario Sanz-Guerrero, Marian Diaz-Vicente, Alfonso Rebolleda, Luis Piñuel Moreno, Gonzalo Luis Alonso Salinas

This database allows the study of the feasibility of using ECG-capable smartwatches as diagnostic tools, focusing on their compliance with clinical standards and their ability to measure critical ECG parameters beyond AF detection.

ischemia fitbit sense ambulatory samsung galaxy watch st-segment apple watch withings scanwatch smartwatch

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation

Philip Chung, Akshay Swaminathan, Alex Goodell, Yeasul Kim, Momsen Reincke, Lichy Han, Ben Deverett, Mohammad Amin Sadeghi, Abdel badih El Ariss, Marc Ghanem, David Seong, Andrew Lee, Caitlin Coombes, Brad Bradshaw, Mahir Sufian, Hyo Jung Hong, Teresa Nguyen, Mohammad Rasouli, Komal Kamra, Mark Burbridge, James McAvoy, Roya Saffary, Stephen Parnell Ma, Dev Dash, James Xie, Ellen Wang, Cliff Schmiesing, Nigam Shah, Nima Aghaeepour

A clinician-labeled dataset for fact-checking long-form clinical text against patient EHRs. The dataset contains LLM-written and human-written Brief Hospital Course summaries decomposed to atomic claim and sentence propositions with annotations.

artificial intelligence natural language processing clinical notes large language models brief hospital course electronic health records long-form text chart review text reranking atomic claim hybrid retrieval clinical informatics clinical medicine fact verification retrieval-augmented generation logical atomism text embedding formal logic llm-as-a-judge llm evaluation

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-tPatchGNN

Chenlong Yin, Weijia Zhang

The processed MIMIC-III dataset for the benchmark of Irregular Multivariate Time Series Forecasting: A Transformable Patching Graph Neural Networks Approach.

Published: April 9, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-CEKG: A Process-Oriented Dataset Derived from MIMIC-IV for Enhanced Clinical Insights

Milad Naeimaei Aali, Felix Mannhardt, Pieter Jelle Toussaint

The MIMIC-IV-Ext-CEKG dataset is crafted for object-centric process mining in healthcare, specifically to create clinical event knowledge graphs for patients with multimorbidity, as well as for data mining and machine learning tasks.

mimic process mining multi entity process mining object centric event log clinical event knowledge graph

Published: April 8, 2025. Version: 1.0.0

Database Restricted Access

ALarms, Outcomes Telemetry with Timing (ALOTT): a Bedside-EMR Database

John Lawrence, Mike Rayo, Timothy Huerta

Carescape is a deidentified 9 month period of high resolution telemetry data linked to Electronic Medical Records.

Published: March 19, 2025. Version: 1.0.0

Database Credentialed Access

EHRCon: Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records

Yeonsu Kwon, Jiho Kim, Gyubok Lee, Seongsu Bae, Daeun Kyung, Wonchul Cha, Tom Pollard, Alistair Johnson, Edward Choi

Dataset for Checking Consistency between Unstructured Notes and Structured Tables in Electronic Health Records

Published: March 19, 2025. Version: 1.0.1

Database Open Access

ReXErr-v1: Clinically Meaningful Chest X-Ray Report Errors Derived from MIMIC-CXR

Vishwanatha Rao, Serena Zhang, Julian Acosta, Subathra Adithan, Pranav Rajpurkar

Chest X-Ray reports containing synthetic errors based upon the MIMIC-CXR database. Errors were injected using LLMs and sampled across common human and AI model errors.

Published: March 19, 2025. Version: 1.0.0

Database Open Access

Leipzig Heart Center ECG-Database: Arrhythmias in Children and Patients with Congenital Heart Disease

Sophia Klehs, Daniel Franke, Bayhas Alhamad, Roman Gebauer, Linus Teich, Tobias Teich, Christian Paech

This annotated ECG database for paediatric and CHD patients features 12-lead and intracardiac recordings, supporting advanced diagnostic algorithms.

artificial intelligence 12-lead ecg arrhythmias chd intracardiac recordings annotated congenital heart disease

Published: March 19, 2025. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

MedVH: Towards Systematic Evaluation of Hallucination for Large Vision Language Models in the Medical Context

Zishan Gu, Jiayuan Chen, Fenglin Liu, Changchang Yin, Ping Zhang

MedVH provides a visual hallucination evaluation benchmark for large language models in the medical context. It formulates tests using chest X-ray images, including multi-choice question answering and long-text generation tasks.

Published: March 11, 2025. Version: 1.0.0