Resources


Database Credentialed Access

Chest ImaGenome Dataset

Joy Wu, Nkechinyere Agu, Ismini Lourentzou, Arjun Sharma, Joseph Paguio, Jasper Seth Yao, Edward Christopher Dee, William Mitchell, Satyananda Kashyap, Andrea Giovannini, Leo Anthony Celi, Tanveer Syeda-Mahmood, Mehdi Moradi

The Chest ImaGenome dataset is a scene graph dataset with additional chronological comparison relations for chest X-rays. It is automatically derived from the MIMIC-CXR dataset. A manually annotated gold standard is also available for 500 patients.

machine learning multimodal radiology chest x-ray scene graph visual question answering visual dialogue object detection semantic reasoning bounding box relation extraction knowledge graph explainability reasoning chest cxr deep learning disease progression

Published: July 13, 2021. Version: 1.0.0

Database Open Access

MIT-BIH Polysomnographic Database

Recordings of multiple physiologic signals during sleep, collected from 18 subjects monitored at Boston's Beth Israel Hospital Sleep Laboratory.

apnea eeg sleep multiparameter ecg respiration

Published: Aug. 3, 1999. Version: 1.0.0

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Challenge Open Access

Will Two Do? Varying Dimensions in Electrocardiography: The PhysioNet/Computing in Cardiology Challenge 2021

Matthew Reyna, Nadi Sadr, Annie Gu, Erick Andres Perez Alday, Chengyu Liu, Salman Seyedi, Amit Shah, Gari Clifford

Will Two Do? Varying Dimensions in Electrocardiography: the PhysioNet/Computing in Cardiology Challenge 2021

challenge cardiac abnormalities multilead ecgs classification competition

Published: July 29, 2022. Version: 1.0.3

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Database Credentialed Access

MIMIC-CXR-JPG - chest radiographs with structured labels

Alistair Johnson, Matt Lungren, Yifan Peng, Zhiyong Lu, Roger Mark, Seth Berkowitz, Steven Horng

Chest x-rays in JPG format with structured labels derived from the associated radiology report.

mimic computer vision radiology chest x-ray deep learning

Published: Nov. 14, 2019. Version: 2.0.0

Database Open Access

Wilson Central Terminal ECG Database

Hossein Moeinzadeh, Gaetano Gargiulo

Wilson Central Terminal ECG signals recorded from 92 patients.

wilson central terminal limb potential unipolar lead electrocardiography ecg

Published: Nov. 13, 2019. Version: 1.0.1

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Database Open Access

Wrist PPG During Exercise

Photoplethysmogram recorded from 8 volunteers during walking, running and bike riding.

multiparameter photoplethysmogram accelerometer movement ecg

Published: Oct. 20, 2017. Version: 1.0.0

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Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, Wojciech Samek, Tobias Schaeffter

The PTB-XL ECG dataset is a large dataset of 21801 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw signal data has been annotated by up to two cardiologists with 71 different ECG statements and is supplemented by rich metadata.

ptb-xl ptb electrocardiography ecg

Published: Nov. 9, 2022. Version: 1.0.3

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Database Restricted Access

KURIAS-ECG: a 12-lead electrocardiogram database with standardized diagnosis ontology

Hakje Yoo, Yunjin Yum, Soowan Park, Jeong Moon Lee, Moonjoung Jang, Yoojoong Kim, Jong-Ho Kim, Hyun-Joon Park, Kap Su Han, Jae Hyoung Park, Hyung Joon Joo

The KURIAS-ECG database is a high-quality 12-lead ECG DB including standard vocabulary (SNOMED CT, OMOP-CDM), and ECG diagnoses of our DB are grouped into 10 diagnoses by applying the minnesota code.

snomed 12-lead minnesota ecg

Published: Nov. 8, 2021. Version: 1.0

Database Credentialed Access

Deidentified Medical Text

Margaret Douglass, Bill Long, George Moody, Peter Szolovits, Li-wei Lehman, Roger Mark, Gari D. Clifford

Gold standard corpus of 2,434 deidentified nursing notes

medical text nursing notes de-identification hipaa

Published: Dec. 18, 2007. Version: 1.0

Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Joshua Wiedekopf, Hannes Ulrich, Alistair Johnson

MIMIC-IV-on-FHIR is a hundred patient demo of MIMIC-IV v2.0 in the Fast Healthcare Interoperability Resources(FHIR) format. MIMIC-IV-on-FHIR provides implementers with a real-world FHIR datastore to aid in FHIR research and development.

mimic electronic health records fhir

Published: June 7, 2022. Version: 2.0