Resources
234 results for "clinical"
Database
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Bridge2AI-Voice: An ethically-sourced, diverse voice dataset linked to health information
The human voice contains complex acoustic markers which have been linked to important health conditions including dementia, mood disorders, and cancer. When viewed as a biomarker, voice is a promising characteristic to measure as it is simple to col…
Database
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Lunguage: A Benchmark for Structured and Sequential Chest X-ray Interpretation
Radiology reports convey detailed clinical observations and capture diagnostic reasoning that evolves over time. However, existing evaluation methods are limited to single-report settings and rely on coarse metrics that fail to capture fine-grained …
fine-grained structured reports
attribute-level clinical reasoning
medical text structuring
longitudinal clinical reasoning
chest x-ray report parsing
medical information structuring
benchmark dataset for radiology report
medical information extraction
structured radiology reports
temporal relation extraction
radiology report benchmarking
longitudinal clinical understanding
Database
Restricted Access
Microbiological, Immunological and Biochemical Characteristics of the Development of Ventilator Associated Pneumonia
The respiratory microbiome plays a critical role in metabolism, immune system maturation, and protection against pathogens. Traditionally, respiratory microbiology in pneumonia focused on identifying a specific pathogen, often disregarding normal or…
Database
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EchoGraph-annotated ECHO-NOTE2NUM examples
This repository releases the EchoGraph-annotated ECHO-NOTE2NUM dataset, containing 45,794 echocardiography reports with comprehensive entity and relation annotations. Each report from the ECHO-NOTE2NUM dataset has been automatically annotated using …
Database
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PatientSim: A Persona-Driven Simulator for Realistic Doctor-Patient Interactions
Doctor-patient consultations require multi-turn, context-aware communication tailored to diverse patient personas. Training or evaluating doctor LLMs in such settings requires realistic patient interaction systems. However, existing simulators often…
Database
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RadGraph-XL: A Large-Scale Expert-Annotated Dataset for Entity and Relation Extraction from Radiology Reports
Radiology reports are essential for clinical care but pose challenges for automated processing due to their unstructured nature. Existing datasets like RadGraph-1.0 focus narrowly on chest X-rays (CXR), limiting their applicability. We introduce Rad…
Database
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HYAMD High-Resolution Fundus Image Dataset for age related macular degeneration (AMD) Diagnosis
The Hillel Yaffe Age Related Macular Degeneration (HYAMD) longitudinal dataset comprises of 1,560 Digital Fundus Images (DFIs) of 325 patients examined at the Hillel Yaffe Medical Center (Hadera, Israel, Helsinki approval number 0048-24-HYMC) provid…
Database
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Community-Acquired Pneumonia, Endotypes and Phenotypes (NACef): Prospective, observational cohort study of Translational Medicine
Community-Acquired Pneumonia (CAP) remains a prominent infectious process associated with elevated in-hospital morbidity and mortality rates. Through the exploration of phenotypes, endotypes, and biomarkers, it becomes feasible to identify individua…
Database
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MIMIC-IV-Ext-Apixaban-Trial-Criteria-Questions
Large-language models (LLMs) show promise for extracting information from clinical notes. Deploying these models at scale can be challenging due to high computational costs, regulatory constraints, and privacy concerns. To address these challenges, …
Database
Credentialed Access
MIMIC-III-Ext-tPatchGNN
This dataset is a curated subset of MIMIC-III (v1.4), specifically formatted to facilitate reproducibility of the experiments in the work t-PatchGNN. It serves as part of a benchmark designed for forecasting irregular multivariate clinical time seri…