Resources

41 results for "structured clinical datasets"

Database Credentialed Access

CXReasonBench: A Benchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays

Hyungyung Lee, Geon Choi, Jung Oh Lee, et al.

Recent progress in Large Vision-Language Models (LVLMs) has enabled promising applications in medical tasks such as report generation and visual question answering. However, existing benchmarks focus mainly on the final diagnostic answer, offering l…
Published: Oct. 23, 2025. Version: 1.0.1
Database Credentialed Access

Embedding-Based Representations for BRSET and mBRSET

David Restrepo, Chenwei Wu, Michael Morley, et al.

BRSET and mBRSET are publicly available Brazilian ophthalmological datasets composed of curated retinal fundus photographs with associated clinical and demographic information. While these resources enable diverse research applications, training dee…
Published: March 30, 2026. Version: 1.0.0
Database Open Access

Synthetic Mention Corpora for Disease Entity Recognition and Normalization

Kuleen Sasse, John David Osborne

Named Entity Recognition (NER) and Entity Normalization (EN) are fundamental tasks in information extraction, particularly in the biomedical and clinical domains. NER identifies textual mentions of entities, while EN maps these mentions to unique id…
Published: Feb. 3, 2025. Version: 1.0.0
Database Credentialed Access

MIMIC-IV-Echo: Echocardiogram Matched Subset

Brian Gow, Tom Pollard, Nathaniel Greenbaum, et al.

The MIMIC-IV-Echo module contains structured echocardiographic measurements and DICOM files from echocardiography exams. Structured measurements are available from 206,488 echocardiogram studies (including 179,928 transthoracic, 16,389 stress, and 1…
Published: Aug. 25, 2026. Version: 1.0.1
Database Credentialed Access

RadGraph-XL: A Large-Scale Expert-Annotated Dataset for Entity and Relation Extraction from Radiology Reports

Jean-Benoit Delbrouck

Radiology reports are essential for clinical care but pose challenges for automated processing due to their unstructured nature. Existing datasets like RadGraph-1.0 focus narrowly on chest X-rays (CXR), limiting their applicability. We introduce Rad…
Published: Sept. 12, 2025. Version: 1.0.0
Database Restricted Access

Swiss-Mammo: A physician-written, synthetic dataset of German mammography reports

Daniel Reichenpfader, Sandro von Däniken, Harald Marcel Bonel

This dataset, Swiss-Mammo, contains 28 manually constructed German mammography reports, each paired with an English translation. The reports are stratified across BI-RADS categories 0 through 6, with four reports per category. All reports were manua…
Published: June 24, 2025. Version: 1.0.1
Database Restricted Access

CheXchoNet: A Chest Radiograph Dataset with Gold Standard Echocardiography Labels

Pierre Elias, Shreyas Bhave

Existing chest radiograph datasets, such as CheXpert and ChestX-ray14, have driven the development of new machine learning approaches to achieve expert or near-expert level performance on a variety of tasks. The primary focus of models developed usi…
Published: March 20, 2024. Version: 1.0.0
Database Restricted Access

Application of Med-PaLM 2 in the refinement of MIMIC-CXR labels

Kendall Park, Rory Sayres, Andrew Sellergren, et al.

MIMIC-CXR is a large, open source dataset that is widely-used in medical AI research. One of the limitations of this dataset is the lack of ground truth labels for the chest X-ray studies. Prior work has extracted structured labels from the MIMIC-CX…
Published: Feb. 4, 2025. Version: 1.0.0
Database Open Access

Behavioral and autonomic dynamics during propofol-induced unconsciousness

Sandya Subramanian, Patrick Purdon, Riccardo Barbieri, et al.

During general anesthesia, both behavioral and autonomic changes are caused by the administration of anesthetics such as propofol. Propofol produces unconsciousness by creating highly structured oscillations in brain circuits. The anesthetic also ha…
Published: July 30, 2021. Version: 1.0
Database Credentialed Access

Nosocomial Risk Datasets from MIMIC-III

Travis Goodwin

Reliable longitudinal risk prediction for hospitalized patients is needed to provide quality care. Our goal is to foster the development of generalizable models capable of leveraging clinical notes to predict healthcare-associated diseases 24–96 hou…
Published: Sept. 15, 2022. Version: 1.0