Resources
50 results for "open data"
Database
Open Access
VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients
In modern anesthesia, multiple medical devices are used simultaneously to comprehensively monitor real-time vital signs to optimize patient care and improve surgical outcomes. However, interpreting the dynamic changes of time-series biosignals and t…
Database
Credentialed Access
MIMIC-Ext-SynNotes: Large-Scale Synthetic Clinical Notes via Rephrasing MIMIC-III/IV with LLMs
MIMIC-III and MIMIC-IV are foundational resources for clinical NLP, but their scale is modest relative to the data volumes needed to train language models. Building on recent advances in synthetic data generation through LLM-based rephrasing, we con…
Database
Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
The advent of large, open access text databases has driven advances in state-of-the-art model performance in natural language processing (NLP). The relatively limited amount of clinical data available for NLP has been cited as a significant barrier …
Software
Open Access
Waveform Database Software Package (WFDB) for MATLAB and Octave
Physiological waveforms - such as electrocardiograms (ECG), electroencephalograms (EEG), electromyograms (EMG) - are generated during the course of routine care. These signals contain information that can be used to understand underlying conditions …
Database
Open Access
PhysioZoo - mammalian NSR databases
The PhysioZoo database contains electrocardiographic recordings (ECG) taken from multiple types of mammals (dogs, rabbits, mice). Each record is provided in 3 different formats: MATLAB (.mat), simple text (.txt), PhysioNet (.hea,.dat,.qrs). For each…
Database
Contributor Review
A multimodal dental dataset facilitating machine learning research and clinic services
Oral diseases affect nearly 3.5 billion people, with the majority residing in low- and middle-income countries. Due to limited healthcare resources, many individuals are unable to access proper oral healthcare services. Image-based machine learning …
Database
Credentialed Access
MIMIC-IV-Ext-Instr: A Dataset of 450K+ EHR-Grounded Instruction-Following Examples
Large language models (LLMs) have shown impressive capabilities in solving a wide range of tasks based on human instructions. However, developing a conversational AI assistant for electronic health record (EHR) data remains challenging due to the la…
Software
Open Access
TWAnalyser - A T-wave Alternans Detector
This software suite consists of Matlab implementations of the widely used Spectral Method (SM) and Modified Moving Average (MMA) for T-wave alternans (TWA) detection. It was initially developed for the PhysioNet/CinC Challenge 2008, in which these a…
Model
Credentialed Access
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create synth…
Database
Credentialed Access
VinDr-CXR: An open dataset of chest X-rays with radiologist annotations
We describe here a dataset of more than 100,000 chest X-ray scans that were retrospectively collected from two major hospitals in Vietnam. Out of this raw data, we release 18,000 images that were manually annotated by a total of 17 experienced radio…