Resources


Database Credentialed Access

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts, et al.

DrugEHRQA is a QA dataset containing question-answers from MIMIC-III tables and discharge summaries.

question-answer qa

Published: April 12, 2022. Version: 1.0.0

Database Credentialed Access

Synthetic Acute Hypotension and Sepsis Datasets Based on MIMIC-III and Published as Part of the Health Gym Project

Nicholas Kuo, Simon Finfer, Louisa Jorm, et al.

This repository hosts the original Health Gym datasets of Acute Hypotension and Sepsis

sepsis acute hypotension synthetic dataset generative modelling wasserstein generative adversarial network reinforcement learning machine learning

Published: Feb. 23, 2022. Version: 1.0.0

Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

Clinical action items annotated over MIMIC-III. 718 discharge summaries are labeled at a sentence- and character-level with multiple action labels including Appointment, Lab, Procedure, Medication, Imaging, Patient Instructions, and Other.

Published: June 21, 2021. Version: 1.0.0

Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

entity and relation extraction graph multi-modal natural language processing radiology

Published: June 3, 2021. Version: 1.0.0

Database Open Access

BIG IDEAs Lab Glycemic Variability and Wearable Device Data

Peter Cho, Juseong Kim, Brinnae Bent, et al.

Glucose measurements and wrist-worn wearable sensor data from highnormoglycemic participants.

biomedical engineering pre-diabetes biomarkers

Published: April 13, 2026. Version: 1.1.3

Database Credentialed Access

Embedding-Based Representations for BRSET and mBRSET

David Restrepo, Chenwei Wu, Michael Morley, et al.

Precomputed image embeddings for the BRSET and mBRSET Brazilian retinal datasets to support efficient, secure, and equitable ophthalmic AI research, enabling tasks such as classification, clustering, multimodal modeling, and fairness analysis.

computer vision ophthalmology vector embeddings

Published: March 30, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-CXR-Ext-ILS: Lesion Segmentation Masks and Instruction-Answer Pairs for Chest X-rays

Geon Choi, Hangyul Yoon, Hyunju Shin, et al.

Instruction-guided lesion segmentation data for chest X-rays, including 1.1M instruction-answer pairs and 91K segmentation masks covering seven major lesion types.

chest x-ray segmentation text-guided segmentation lesion segmentation

Published: March 25, 2026. Version: 1.0.0

Database Credentialed Access

Structured Viewing Classification Annotations From the MIMIC-IV-ECHO Dataset (ECHOVIEW)

Sampath Rapuri, Sofia Sapeta Dias, Maria Salomé Carvalho, et al.

ECHOVIEW provides structured viewing class annotations for 29,196 transthoracic echocardiograms derived from MIMIC-IV-ECHO using a pretrained CNN. Manual clinician review shows substantial agreement (κ=0.69) with these annotations.

Published: March 17, 2026. Version: 0.1

Database Credentialed Access

MedVH: Towards Systematic Evaluation of Hallucination for Large Vision Language Models in the Medical Context

Zishan Gu, Jiayuan Chen, Fenglin Liu, et al.

MedVH provides a visual hallucination evaluation benchmark for large language models in the medical context. It formulates tests using chest X-ray images, including multi-choice question answering and long-text generation tasks.

Published: Dec. 10, 2025. Version: 1.0.1

Database Restricted Access

Microbiological, Immunological and Biochemical Characteristics of the Development of Ventilator Associated Pneumonia

Natalia Sanabria-Herrera, Ingrid Gisell Bustos Moya, Luis Felipe Reyes

This study explores the respiratory microbiome's role in nosocomial lower respiratory tract infections in ICU patients. Conducted in Chía, Colombia, revealing the microbiome's impact on disease progression.

Published: Dec. 5, 2025. Version: 1.1.1