Resources

Automatically summarizing patients’ main problems from the daily care notes in the electronic health record can help mitigate information and cognitive overload for clinicians and provide augmented intelligence via computerized diagnostic decision s…

Applying methods in natural language processing on electronic health records (EHR) data is a growing field. Existing corpus and annotation focus on modelling textual features and relation prediction [1] . However, there is a paucity of annotated cor…

Patients treated in the intensive care unit (ICU) are closely monitored and receive intensive treatment. Such aggressive monitoring and treatment will generate high-granularity data from both electronic healthcare records and nursing chart. These da…

Electronic Health Records (EHR) contain patient records, stored in structured tables as well as unstructured clinical notes. The information in structured and unstructured EHR records is not strictly disjoint: information may be duplicated, contradi…

These two synthetic datasets comprise vital signs, laboratory test results, administered fluid boluses and vasopressors for 3,910 patients with acute hypotension and for 2,164 patients with sepsis in the Intensive Care Unit (ICU). The patient cohort…

We created a dataset of clinical action items annotated over MIMIC-III. This dataset, which we call CLIP, is annotated by physicians and covers 718 discharge summaries, representing 107,494 sentences. Annotations were collected as character-level sp…

RadGraph is a dataset of entities and relations in full-text radiology reports. We designed a novel information extraction (IE) schema to structure clinical information in a radiology report with four entities and three relations. Our train set cons…

EHRNote-ChatQA is a benchmark for evidence-grounded, multi-turn clinical question answering over longitudinal discharge summaries. Derived from de-identified MIMIC-IV data, it contains 967 patient-level samples covering one to five discharge summari…

Bedside monitors in intensive care units continuously generate high-resolution physiological signals that are rarely preserved systematically for research. This resource makes available to the community a set of multiparametric waveform recordings p…

Dysglycaemia is common in hospitalised and critically ill patients, and non-invasive estimation of blood glucose from the electrocardiogram (ECG) is an active research area. However, large public resources that link ECGs to contemporaneous glucose m…