Resources


Database Open Access

Leipzig Heart Center ECG-Database: Arrhythmias in Children and Patients with Congenital Heart Disease

Sophia Klehs, Daniel Franke, Bayhas Alhamad, et al.

This annotated ECG database for paediatric and CHD patients features 12-lead and intracardiac recordings, supporting advanced diagnostic algorithms.

12-lead arrhythmias chd intracardiac recordings annotated congenital heart disease ecg artificial intelligence

Published: March 19, 2025. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, et al.

We introduce a hierarchical annotation suite of tasks addressing clinical text understanding, reasoning and abstraction over evidence, and diagnosis summarization. One task is section tagging major section and the other task is diagnosis generation.

Published: Sept. 30, 2022. Version: 1.0.0

Database Credentialed Access

CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes

James Mullenbach, Yada Pruksachatkun, Sean Adler, et al.

Clinical action items annotated over MIMIC-III. 718 discharge summaries are labeled at a sentence- and character-level with multiple action labels including Appointment, Lab, Procedure, Medication, Imaging, Patient Instructions, and Other.

Published: June 21, 2021. Version: 1.0.0

Database Credentialed Access

RadGraph: Extracting Clinical Entities and Relations from Radiology Reports

Saahil Jain, Ashwin Agrawal, Adriel Saporta, et al.

RadGraph is a dataset of entities and relations in full-text chest X-ray radiology reports, which are obtained using a novel information extraction (IE) schema to capture clinically relevant information in a radiology report.

entity and relation extraction graph multi-modal natural language processing radiology

Published: June 3, 2021. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction

Zhichao Yang, Gregory Lyng, Sanjit Batra, et al.

This dataset is an evidence‑grounded benchmark built on MIMIC‑IV discharge summaries that evaluates how well large language models can verify ICD‑10 medical concepts, including implicitly documented diagnoses, by identifying supporting text evidence.

Published: March 23, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-Notes

Darren Liu, Monique Bouvier, Delgersuren Bold, et al.

We evaluated general large language models' performance in clinical information extraction on MIMIC-III notes.

Published: Feb. 27, 2026. Version: 1.0.0

Database Open Access

VitalDB Arrhythmia Database: An Anesthesiologist-Validated Large-Scale Intraoperative Arrhythmia Dataset with Beat and Rhythm Labels

Dain Eun, Kayoung Shim, Hyunsoo Lee, et al.

We present a comprehensive intraoperative arrhythmia dataset with 734,528 seconds of ECG recordings from 482 patients, featuring over 660,000 beats annotated and validated by five anesthesiologists.

ppg vitaldb arterial waveform intraoperative dataset ecg

Published: Feb. 26, 2026. Version: 1.0.0

Database Credentialed Access

Lunguage: A Benchmark for Structured and Sequential Chest X-ray Interpretation

Jong Hak Moon, Geon Choi, Paloma Rabaey, et al.

A radiologist-annotated benchmark of structured chest X-ray reports at single and sequential levels, comprising 1,473 reports across 18 relation types and 80 longitudinal cases.

fine-grained structured reports attribute-level clinical reasoning medical text structuring longitudinal clinical reasoning chest x-ray report parsing medical information structuring benchmark dataset for radiology report medical information extraction structured radiology reports temporal relation extraction radiology report benchmarking longitudinal clinical understanding

Published: Jan. 11, 2026. Version: 1.0.0

Database Credentialed Access

PIFIR: PET-CT Invasive Fungal Infection Reports

Vlada Rozova, Anna Khanina, Jeremy Ong, et al.

A corpus of PET-CT reports annotated for terminology relevant to fungal infections. Ideal for validation of named entity recognition and relation extraction methods.

nlp clinical documentation information extraction invasive fungal infections

Published: Feb. 27, 2025. Version: 1.0.0

Database Credentialed Access

FFA-IR: Towards an Explainable and Reliable Medical Report Generation Benchmark

Mingjie Li, Wenjia Cai, Rui Liu, et al.

Benchmark dataset for report generation based on fundus fluorescein angiography images and reports.

fundus fluorescein angiography medical report generation vision and language explainable and reliable evaluation

Published: Jan. 21, 2025. Version: 1.1.0