Resources
500 resources
Database
Open Access
CheXmask-U: Uncertainty Estimation for Landmark-Based Anatomical Segmentation Masks in Chest X-ray Images
CheXmask-U provides anatomical segmentation masks of chest X-rays derived from landmarks with node-wise uncertainty estimates, enabling landmark-level and image-level analysis for uncertainty-aware research and robustness evaluation.
Database
Credentialed Access
MIMIC-III-Ext-SBDH: An annotated social and behavioral determinants of health dataset
An annotated social and behavioral determinants of health dataset derived from clinical notes in the MIMIC-III database.
Database
Credentialed Access
MIMIC-III-Ext-VeriFact-BHC: Labeled Propositions From Brief Hospital Course Summaries for Long-form Clinical Text Evaluation
A clinician-labeled dataset for fact-checking long-form clinical text against patient EHRs. The dataset contains LLM-written and human-written Brief Hospital Course summaries decomposed to atomic claim and sentence propositions with annotations.
natural language processing
clinical informatics
formal logic
chart review
text embedding
brief hospital course
long-form text
logical atomism
retrieval-augmented generation
text reranking
clinical medicine
atomic claim
fact verification
hybrid retrieval
llm-as-a-judge
llm evaluation
clinical notes
large language models
electronic health records
artificial intelligence
Database
Credentialed Access
MIMIC-Ext-CXR-QBA: A Structured, Tagged, and Localized Visual Question Answering Dataset with Question-Box-Answer Triplets and Scene Graphs for Chest X-ray Images
We present a large-scale CXR VQA dataset derived from MIMIC-CXR with 42M QA pairs, featuring hierarchical answers, bounding boxes, and structured tags. We generated QA-pairs using LLM-based extraction from radiology reports and localization models.
Database
Credentialed Access
MIMIC-IV-Echo: Echocardiogram Matched Subset
The MIMIC-IV-ECHO module contains structured measurements from over 200,000 echocardiograms and more than 500,000 echocardiogram DICOM files. Patients overlap with those in the MIMIC-IV Clinical Database.
Database
Credentialed Access
SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia
SCRIPT contains clinical data and physician adjudication from patients admitted to an intensive care unit, received mechanical ventilation, and underwent bronchoalveolar lavage sampling because of pneumonia suspicion.
Database
Contributor Review
Medical Information Mart for Intensive Care Brazil (MIMIC-BR): a Brazilian Dataset of Anonymized Hospital and ICU Clinical Data
Medical Information Mart for Intensive Care Brazil (MIMIC-BR) is a Brazilian dataset of hospital and ICU adult patients anonymized data. It includes 31,789 admissions to the Einstein Hospital Israelita during a period of 3 years in the last 10 years
Database
Contributor Review
BIDMC Metabolomic Cohort of Adults with Biopsy-Proven MASLD
De-identified serum metabolomics from an Australian cohort of adults with and without biopsy-proven MASLD. Includes 1,618 targeted metabolomic features quantified by UPLC-MS/MS (Metabolon Inc.).
Database
Open Access
Minute level step counts and physical activity data from the National Health and Nutrition Examination Survey (NHANES) 2011-2014
Minute level step counts obtained from five step counting algorithms for raw accelerometry data, and minute level Activity Counts, MIMS, wear predictions, and wear flags for all participants who wore accelerometers in NHANES 2011-2014.
Database
Restricted Access
Kingston ICU AF Dataset
A dataset for atrial fibrillation detection research with 596 labelled 10-second ECGs from an ICU in Kingston, Ontario, Canada.