Resources
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
opioid use disorder substance use natural language processing clinical notes
Published: Feb. 8, 2023. Version: 1.0.0
Database Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0
Database Credentialed Access
Learning to Ask Like a Physician: a Discharge Summary Clinical Questions (DiSCQ) Dataset
Eric Lehman
question generation question answering machine learning
Published: July 28, 2022. Version: 1.0
Database Credentialed Access
MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing
Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, Danai Koutra, Michael Sjoding, Jenna Wiens
preprocessing electronic health record machine learning
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access
National Institutes of Health Stroke Scale (NIHSS) Annotations for the MIMIC-III Database
Jiayang Wang, Xiaoshuo Huang, Lin Yang, Jiao Li
Published: Jan. 25, 2021. Version: 1.0.0
Database Credentialed Access
Phenotype Annotations for Patient Notes in the MIMIC-III Database
Edward Moseley, Leo Anthony Celi, Joy Wu, Franck Dernoncourt
patient classification natural language processing
Published: March 5, 2020. Version: 1.20.03
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr pediatrics clinical decision support polysomnography sleep study ecg electronic health records sleep disorders
Published: Oct. 27, 2021. Version: 3.1.0
Database Credentialed Access
MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images
Seongsu Bae, Daeun Kyung, Jaehee Ryu, Eunbyeol Cho, Gyubok Lee, Sunjun Kweon, Jungwoo Oh, Lei JI, Eric Chang, Tackeun Kim, Edward Choi
question answering multimodal benchmark radiology evaluation visual question answering electronic health records deep learning chest x-ray machine learning
Published: July 19, 2024. Version: 1.0.0
Challenge Credentialed Access
Discharge Me: BioNLP ACL'24 Shared Task on Streamlining Discharge Documentation
Justin Xu
generation bionlp acl discharge summary
Published: April 12, 2024. Version: 1.3
Database Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
Harlin Lee, Boyue Li, Yungui Huang, Yuejie Chi, Simon Lin
eeg ehr pediatrics clinical decision support polysomnography sleep study ecg electronic health records sleep disorders
Published: Oct. 27, 2021. Version: 3.1.0