Resources

This dataset release provides medication extraction labels for a subset of 600 discharge summaries from the 2023 MIMIC-IV-Note dataset. These labels are consistent with the schema from the 2009 i2b2 Workshop on NLP Challenges dataset. We utilized a …

Segmenting the heart and lungs from chest X-ray images is essential for accurate disease diagnosis, enabling the calculation of image-derived digital biomarkers for cardiopulmonary health assessment. Furthermore, creation of annotated data sets can …

We introduce a dataset of people’s names and clinical note templates to support research on the demographic bias of de-identification systems. The dataset contains 16 name sets that vary along four demographic dimensions: gender, race, name populari…

Pulse oximeters are medical devices used to assess peripheral arterial oxygen saturation ( S p O 2 SpO_2 ) noninvasively. In contrast, the "gold standard" requires arterial blood to be drawn to measure the arterial oxygen saturation ( S a O…

This database contains image embeddings from the DICOM images of the MIMIC V2.0.0 Chest X-Ray database, generated using the approach described in “Simplified Transfer Learning for Chest Radiography Models Using Less Data”. The image embeddings are c…

Opioid use disorder (OUD) is underdiagnosed in health system settings, limiting research on OUD using electronic health records (EHRs). Medical encounter notes can enrich structured EHR data with documented signs and symptoms of OUD and social risks…

Recent advances in scaling large language models (LLMs) has resulted in significant improvements over a number of natural language processing benchmarks. There has been some work to pretrain these language models over clinical text. These works demo…

Reliable longitudinal risk prediction for hospitalized patients is needed to provide quality care. Our goal is to foster the development of generalizable models capable of leveraging clinical notes to predict healthcare-associated diseases 24–96 hou…

As more and more artificial intelligence (AI) or deep learning technologies have been applied to medical image applications such as radiological finding identification in chest X-rays (CXRs), the interpretability of the prediction model is crucial f…

These two synthetic datasets comprise vital signs, laboratory test results, administered fluid boluses and vasopressors for 3,910 patients with acute hypotension and for 2,164 patients with sepsis in the Intensive Care Unit (ICU). The patient cohort…