Resources


Model Credentialed Access

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Kenneth Kehl, Pavel Trukhanov, Christopher Fong, Justin Jee, Karl Pichotta, Morgan Paul, Chelsea Nichols, Michele Waters, Nikolaus Schultz, Deborah Schrag

The DFCI-imaging-student and DFCI-medonc-student AI models for extracting cancer outcomes from imaging reports and medical oncologist notes from electronic health records.

Published: Oct. 24, 2024. Version: 1.0.0

Database Restricted Access

Gout Emergency Department Chief Complaint Corpora

John David Osborne, Tobias O'Leary, Amy Mudano, James Booth, Giovanna Rosas, Gurusai Sujitha Peramsetty, Anthony Knighton, Jeff Foster, Ken Saag, Maria Ioana Danila

A corpus of chief complaints tagged with predicted gout flare status and chart reviewed gout flare status. Ideal for input to masked language model training to supplement lengthy clinical text notes.

gout emergency department nlp

Published: Oct. 19, 2020. Version: 1.0

Database Open Access

PADS - Parkinsons Disease Smartwatch dataset

Julian Varghese, Alexander Brenner, Lucas Plagwitz, Catharina van Alen, Michael Fujarski, Tobias Warnecke

The PADS dataset contains smartwatch-based records from interactive neurological assessments of Parkinsons disease patients, differential diagnoses and healthy controls. The data is complemented with non-motor symptoms and medical history information

wearables movement disorders parkinsons disease

Published: March 25, 2024. Version: 1.0.0

Database Restricted Access

EchoNext: A Dataset for Detecting Echocardiogram-Confirmed Structural Heart Disease from ECGs

Pierre Elias, Joshua Finer

EchoNext is a curated dataset of electrocardiograms (ECGs) paired with echocardiogram-confirmed structural heart disease labels, designed to support the development and validation of machine learning models.

heart failure clinical decision support artificial intelligence health equity ecg machine learning deep learning electrocardiogram aortic stenosis cardiovascular screening valvular heart disease digital health ai model deployment left ventricular dysfunction ai in healthcare population health transthoracic echocardiogram structural heart disease

Published: Sept. 16, 2025. Version: 1.1.0

Database Credentialed Access

MIMIC-IV-Ext-22MCTS: A 22 Millions-Event Temporal Clinical Time-Series Dataset with Relative Timestamp

Jing Wang, Xing Niu, Tong Zhang, Jie Shen, Juyong Kim, Jeremy Weiss

It is a time series clinical events dataset with concrete temporal information. The dataset consists of 22,588,586 clinical events and related timestamps from 267,284 discharge summaries of the MIMIC-IV-Note.

mimic clinical event annotation time series temporal annotation

Published: Sept. 29, 2025. Version: 1.0.0

Database Restricted Access

EchoNext: A Dataset for Detecting Echocardiogram-Confirmed Structural Heart Disease from ECGs

Pierre Elias, Joshua Finer

EchoNext is a curated dataset of electrocardiograms (ECGs) paired with echocardiogram-confirmed structural heart disease labels, designed to support the development and validation of machine learning models.

heart failure clinical decision support artificial intelligence health equity ecg machine learning deep learning electrocardiogram aortic stenosis cardiovascular screening valvular heart disease digital health ai model deployment left ventricular dysfunction ai in healthcare population health transthoracic echocardiogram structural heart disease

Published: Sept. 16, 2025. Version: 1.1.0

Challenge Credentialed Access

BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization

Yanjun Gao, Dmitriy Dligach, Timothy Miller, Majid Afshar

This is the data storage for BioNLP Workshop Shared Task 1A: Problem List Summarization.

bionlp clinical natural language processing electronic health record summarization

Published: Nov. 12, 2023. Version: 2.0.0