Resources


Database Credentialed Access

MIMIC-IV-ECG-Ext-ICD: Diagnostic labels for MIMIC-IV-ECG

Nils Strodthoff, Juan Miguel Lopez Alcaraz, Wilhelm Haverkamp

Dataset that links ECG records from MIMIC-IV-ECG to ED discharge and hospital discharge diagnoses, which enables to train general ECG prediction models based on clinical labels and facilitates the retrieval of further clinical metadata from MIMIC-IV.

machine learning electrocardiography mimic

Published: Aug. 30, 2024. Version: 1.0.1


Database Credentialed Access

MedVAL-Bench: Expert-Annotated Medical Text Validation Benchmark

Asad Aali, Vasiliki Bikia, Maya Varma, et al.

MedVAL-Bench is the first large-scale physician-validated benchmark for medical text validation, spanning 6 diverse medical tasks and containing 840 language model-generated outputs annotated by 12 physicians with error assessments and risk grades.

Published: Nov. 14, 2025. Version: 1.0.1


Database Credentialed Access

CXR-Align: A Benchmark for CXR-Report Alignment with Negations

Hanbin Ko

CXR-Align is a benchmark dataset created to evaluate vision-language models' capability to interpret negations in chest X-ray (CXR) reports, featuring systematically modified reports from MIMIC-CXR.

Published: Aug. 21, 2025. Version: 1.0.0


Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, et al.

The PTB-XL ECG dataset is a large dataset of 21801 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw signal data has been annotated by up to two cardiologists with 71 different ECG statements and is supplemented by rich metadata.

ptb-xl ptb ecg electrocardiography

Published: Nov. 9, 2022. Version: 1.0.3

Visualize waveforms

Database Credentialed Access

DrugEHRQA: A Question Answering Dataset on Structured and Unstructured Electronic Health Records For Medicine Related Queries

Jayetri Bardhan, Anthony Colas, Kirk Roberts, et al.

DrugEHRQA is a QA dataset containing question-answers from MIMIC-III tables and discharge summaries.

question-answer qa

Published: April 12, 2022. Version: 1.0.0


Database Open Access

MIMIC-IV Clinical Database Demo on FHIR

Alex Bennett, Hannes Ulrich, Joshua Wiedekopf, et al.

The MIMIC-IV Clinical Database Demo on FHIR is a 100 patient subset of the MIMIC-IV v2.2 and MIMIC-IV-ED v2.2 clinical databases converted into the Fast Healthcare Interoperability Resources (FHIR) format.

fhir electronic health records mimic

Published: Aug. 27, 2025. Version: 2.1.0


Database Credentialed Access

MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, et al.

MS-CXR is a new dataset containing 1162 chest X-ray bounding box labels paired with radiology text descriptions, annotated and verified by two board-certified radiologists.

vision-language processing chest x-ray phrase grounding localization

Published: Nov. 15, 2024. Version: 1.1.0


Database Credentialed Access

MS-CXR-T: Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing

Shruthi Bannur, Stephanie Hyland, Qianchu Liu, et al.

The MS-CXR-T is a multimodal benchmark that enhances the MIMIC-CXR v2 dataset by including expert-verified annotations. Its goal is to evaluate biomedical visual-language processing models in terms of temporal semantics extracted from image and text.

disease progression cxr vision-language processing chest x-ray radiology multimodal

Published: March 17, 2023. Version: 1.0.0


Database Credentialed Access

MIMIC-III-Ext-tPatchGNN

Chenlong Yin, Weijia Zhang

The processed MIMIC-III dataset for the benchmark of Irregular Multivariate Time Series Forecasting: A Transformable Patching Graph Neural Networks Approach.

Published: April 9, 2025. Version: 1.0.0


Model Credentialed Access

Medical AI Research Foundations: A repository of medical foundation models

Shekoofeh Azizi, Jan Freyberg, Laura Culp, et al.

Medical AI Research Foundations is a repository of medical foundation models.

Published: April 25, 2023. Version: 1.0.0