Resources
177 results for "medication"
Model
Credentialed Access
EntityBERT: BERT-based Models Pretrained on MIMIC-III with or without Entity-centric Masking Strategy for the Clinical Domain
Transformer-based neural language models have led to breakthroughs for a variety of natural language processing (NLP) tasks. However, most models are pretrained on general domain data. We propose a methodology to produce a model focused on the clini…
Database
Credentialed Access
NCH Sleep DataBank: A Large Collection of Real-world Pediatric Sleep Studies with Longitudinal Clinical Data
In order to accelerate research on pediatric sleep and its connection to health, Nationwide Children's Hospital (NCH) and Carnegie Mellon University (CMU) introduce the NCH Sleep DataBank. This dataset has 3,984 pediatric sleep studies on 3,673 uniq…
Software
Open Access
Lightweight 12-lead ECG viewer for MATLAB
Electrocardiograms (ECGs) provide time-varying measurements of the electrical activity of the heart. These signals can provide insights into underlying aspects of heart health and disease. Here we provide software for viewing 12-lead ECG files (in .…
Database
Restricted Access
Upper body thermal images and associated clinical data from a pilot cohort study of COVID-19
The prospective upper body thermal images SARS-CoV2 association study was designed to test the hypothesis that thermal videos may aid in the early diagnosis of COVID-19. The study recorded a set of measurements from 252 participants regarding PCR re…
Database
Open Access
MIMIC-IV demo data in the OMOP Common Data Model
In this project, the MIMIC-IV demo database was used to create an Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM) instance. The transformation was built making use of template scripts and concept mappings from a previous pr…
Database
Credentialed Access
CLIP: A Dataset for Extracting Action Items for Physicians from Hospital Discharge Notes
We created a dataset of clinical action items annotated over MIMIC-III. This dataset, which we call CLIP, is annotated by physicians and covers 718 discharge summaries, representing 107,494 sentences. Annotations were collected as character-level sp…
Model
Credentialed Access
Clinical BERT Models Trained on Pseudo Re-identified MIMIC-III Notes
This project contains the weights of 7 different BERT models trained over a surrogate re-identified set of MIMIC-III (v1.4) notes. Each model is suitable for direct compatibility with the HuggingFace framework; users can easily load and apply the mo…
Database
Open Access
Effect of 24-hour sleep deprivation on cerebral hemodynamics and cognitive performance
Sleep deprivation (SD) is associated with decreased cognitive performance, but the underlying mechanisms are poorly understood. To assess the impact of SD on cerebral hemodynamics in the frontal lobe, functional near-infrared spectroscopy (fNIRS) me…
Database
Open Access
Mental workload during n-back task captured by TransCranial Doppler (TCD) sonography and functional Near-Infrared Spectroscopy (fNIRS) monitoring
The authors used this dataset to assess the neurovascular coupling responses evoked by a cognitive paradigm with the aid of TransCranial Doppler (TCD) sonography and functional Near-InfraRed Spectroscopy (fNIRS). Fourteen healthy young individuals w…
Database
Credentialed Access
Curated Data for Describing Blood Glucose Management in the Intensive Care Unit
Analysis of real-world glucose and insulin clinical data recorded in electronic health records can provide insights into tailored approaches to clinical care, but still present many analytic challenges. The present data subsets are the result of a d…