Resources


Database Credentialed Access

MIMIC-IV-Note: Deidentified free-text clinical notes

Alistair Johnson, Tom Pollard, Steven Horng, et al.

Deidentified free-text clinical notes for patients in the MIMIC-IV Clinical Database.

deidentification critical care electronic health record natural language processing mimic clinical notes

Published: Jan. 6, 2023. Version: 2.2

Database Credentialed Access

RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports

Sarvesh Soni, Kirk Roberts

RadQA is an electronic health record question answering dataset containing clinical questions that can be answered using the Findings and Impressions sections of radiology reports

machine reading comprehension radiology reports question answering clinical notes electronic health records

Published: Dec. 9, 2022. Version: 1.0.0

Database Credentialed Access

CXR-PRO: MIMIC-CXR with Prior References Omitted

Vignav Ramesh, Nathan Chi, Pranav Rajpurkar

CXR-PRO is an adaptation of the MIMIC-CXR dataset (consisting of chest radiographs and their associated free-text radiology reports) with references to non-existent priors removed.

generation free-text radiology reports references to priors retrieval large language models

Published: Nov. 23, 2022. Version: 1.0.0

Database Open Access

PTB-XL, a large publicly available electrocardiography dataset

Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, et al.

The PTB-XL ECG dataset is a large dataset of 21801 clinical 12-lead ECGs from 18869 patients of 10 second length. The raw signal data has been annotated by up to two cardiologists with 71 different ECG statements and is supplemented by rich metadata.

ptb-xl ptb electrocardiography ecg

Published: Nov. 9, 2022. Version: 1.0.3

Visualize waveforms

Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, et al.

We introduce a hierarchical annotation suite of tasks addressing clinical text understanding, reasoning and abstraction over evidence, and diagnosis summarization. One task is section tagging major section and the other task is diagnosis generation.

Published: Sept. 30, 2022. Version: 1.0.0

Database Open Access

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

Hyung-Chul Lee, Chul-Woo Jung

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

waveform anesthesia intraoperative biosignal vitaldb ecg

Published: Sept. 21, 2022. Version: 1.0.0

Database Credentialed Access

MIMIC-III Clinical Database CareVue subset

Alistair Johnson, Tom Pollard, Roger Mark

A subset of the MIMIC-III Clinical Database containing only patients admitted from 2001 - 2008.

Published: Sept. 21, 2022. Version: 1.4

Database Open Access

A large scale 12-lead electrocardiogram database for arrhythmia study

Jianwei Zheng, Hangyuan Guo, Huimin Chu

A 12-lead electrocardiogram database for arrhythmia research covering more than 10,000 patients

Published: Aug. 24, 2022. Version: 1.0.0

Visualize waveforms

Database Credentialed Access

Chest X-ray segmentation images based on MIMIC-CXR

Li-Ching Chen, Po-Chih Kuo, Ryan Wang, et al.

A chest x-rays segmentation dataset derived from MIMIC-CXR based on deep learning algorithm and human examination.

segmentation chest x-rays cxr

Published: Aug. 18, 2022. Version: 1.0.0

Database Open Access

Continuous Cuffless Monitoring of Arterial Blood Pressure via Graphene Bioimpedance Tattoos

Bassem Ibrahim, Dmitry Kireev, Kaan Sel, et al.

Cuffless blood pressure data repository that includes raw time data for 4-channel Bioimpedance signals using Graphene Tattoos from the wrist with synchronized continuous blood pressure and PPG signals from 7 subjects

blood pressure graphene bioimpedance ppg

Published: June 4, 2022. Version: 1.0.0