Resources


Database Credentialed Access

Clinical Time Series Datasets for Trajectory Flow Matching Evaluation: ICU Sepsis, ICU Cardiac Arrest, and ICU GIB Cohorts

Yuan Pu, Dennis Shung, Alexander Tong, et al.

This resource comprises three clinical time series datasets used in the paper Trajectory Flow Matching with Applications to Clinical Time Series Modeling to evaluate models for handling irregularly sampled data in critical care settings.

clinical time series

Published: March 23, 2026. Version: 1.0.0

Database Credentialed Access

MIMIC-IV-Ext-22MCTS: A 22 Millions-Event Temporal Clinical Time-Series Dataset with Relative Timestamp

Jing Wang, Xing Niu, Tong Zhang, et al.

It is a time series clinical events dataset with concrete temporal information. The dataset consists of 22,588,586 clinical events and related timestamps from 267,284 discharge summaries of the MIMIC-IV-Note.

mimic clinical event annotation time series temporal annotation

Published: Sept. 29, 2025. Version: 1.0.0

Database Credentialed Access

MIMIC-III-Ext-tPatchGNN

Chenlong Yin, Weijia Zhang

The processed MIMIC-III dataset for the benchmark of Irregular Multivariate Time Series Forecasting: A Transformable Patching Graph Neural Networks Approach.

Published: April 9, 2025. Version: 1.0.0

Software Open Access

Data Chromatix

Analysis of biomedical time series plays a key role in clinical management and basic investigation. However, most conventional monitors streaming data in real-time show only the most recent values, not referenced to past dynamics. The proposed visua…

visualization

Published: Nov. 9, 2015. Version: 1.0.0

Database Open Access

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

Hyung-Chul Lee, Chul-Woo Jung

VitalDB, a high-fidelity multi-parameter vital signs database in surgical patients

waveform anesthesia intraoperative biosignal vitaldb ecg

Published: Sept. 21, 2022. Version: 1.0.0

Database Open Access

MIMIC-III Waveform Database

Benjamin Moody, George Moody, Mauricio Villarroel, et al.

The MIMIC-III Waveform Database contains numerous physiological signals (including continuous ECG, PPG, ABP, and other signals) and periodic measurements, recorded by bedside patient monitors from about 30,000 patients in intensive care units.

Published: April 7, 2020. Version: 1.0

Visualize waveforms

Database Credentialed Access

A Temporal Dataset for Respiratory Support in Critically Ill Patients

Mira Moukheiber, Lama Moukheiber, Dana Moukheiber, et al.

A benchmark dataset offering hourly records over a 90-day period for 50,920 ICU subjects, including dynamic pulmonary function data and a spectrum of covariates for respiratory intervention analyses.

oberservational data time-series

Published: April 15, 2025. Version: 1.1.0

Software Open Access

Vital File Web Viewer: A Browser-Based Tool for Viewing High-Resolution Vital Signs Data

Eunsun Rachel Lee, Hyung-Chul Lee

A standalone, browser-based viewer for .vital files that enables interactive visualization of high-resolution vital signs data without server-side components.

vitaldb vital file

Published: Sept. 1, 2025. Version: 1.0.0

Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, et al.

We introduce a hierarchical annotation suite of tasks addressing clinical text understanding, reasoning and abstraction over evidence, and diagnosis summarization. One task is section tagging major section and the other task is diagnosis generation.

Published: Sept. 30, 2022. Version: 1.0.0

Database Restricted Access

Electrocardiogram-Capable Smartwatches: Assessing Their Clinical Accuracy and Application

Joaquin Recas, Mauro Buelga Suárez, Sergio González-Cabeza, et al.

This database allows the study of the feasibility of using ECG-capable smartwatches as diagnostic tools, focusing on their compliance with clinical standards and their ability to measure critical ECG parameters beyond AF detection.

ischemia fitbit sense ambulatory samsung galaxy watch st-segment apple watch withings scanwatch smartwatch

Published: April 9, 2025. Version: 1.0.0