Resources

41 results for "structured clinical datasets"

Database Credentialed Access

MIMIC-IV-Ext Triage Instruction Corpus

Qingyang Shen, Quan Guo

Emergency department (ED) overcrowding leads to delayed care, increased patient risk, and inefficient resource use. The MIMIC-IV-Ext Triage Instruction Corpus (MIETIC) addresses this by providing 9,629 structured triage cases from MIMIC-IV, aligned …
Published: March 4, 2025. Version: 1.0.0
Database Credentialed Access

MIMIC-III and eICU-CRD: Feature Representation by FIDDLE Preprocessing

Shengpu Tang, Parmida Davarmanesh, Yanmeng Song, et al.

This is a preprocessed dataset derived from patient records in MIMIC-III and eICU, two large-scale electronic health record (EHR) databases. It contains features and labels for 5 prediction tasks involving 3 adverse outcomes (prediction times listed…
Published: April 28, 2021. Version: 1.0.0
Database Credentialed Access

Annotation dataset of social determinants of health from MIMIC-III Clinical Care Database

Marco Guevara, Shan Chen, Spencer Thomas, et al.

Social determinants of health (SDoH) have an important impact on patient outcomes but are incompletely collected from the electronic health records (EHR). This study researched the ability of large language models to extract SDoH from free text in E…
Published: Jan. 24, 2024. Version: 1.0.1
Database Open Access

Hillel Yaffe Glaucoma Dataset (HYGD): A Gold-Standard Annotated Fundus Dataset for Glaucoma Detection

Or Abramovich, Hadas Pizem, Jonathan Fhima, et al.

Glaucomatous optic neuropathy (GON) is a leading cause of irreversible blindness worldwide, affecting an estimated 64.3 million people globally with projections reaching 111.8 million by 2040. Approximately 50% of cases remain undiagnosed until adva…
Published: March 16, 2026. Version: 1.1.0
Database Credentialed Access

EHRNote-ChatQA: A Benchmark for Evidence-Grounded Multi-Turn Clinical Question Answering over Longitudinal Discharge Summaries

Jiyoun Kim, Muhan Yeo, Eunhye Jang, et al.

EHRNote-ChatQA is a benchmark for evidence-grounded, multi-turn clinical question answering over longitudinal discharge summaries. Derived from de-identified MIMIC-IV data, it contains 967 patient-level samples covering one to five discharge summari…
Published: Oct. 19, 2026. Version: 1.0.0
Database Credentialed Access

MIMIC-IV-ECHO-Ext-MIMICEchoQA: A Benchmark Dataset for Echocardiogram-Based Visual Question Answering

Rahul Thapa, Andrew Li, Qingyang Wu, et al.

We present MIMICEchoQA, a benchmark dataset for echocardiogram-based question answering, built from the publicly available MIMIC-IV-ECHO database. Each echocardiographic study was paired with the closest discharge summary within a 7-day window, and …
Published: Oct. 7, 2025. Version: 1.0.0
Database Restricted Access

Pulmonary Edema Severity Grades Based on MIMIC-CXR

Ruizhi Liao, Geeticka Chauhan, Polina Golland, et al.

Clinical management decisions for patients with acutely decompensated heart failure and many other diseases are often based on grades of pulmonary edema severity, rather than its mere absence or presence. Chest radiographs are commonly performed to …
Published: Feb. 9, 2021. Version: 1.0.1
Database Restricted Access

OpenOximetry Repository

Nicholas Fong, Michael Lipnick, Philip Bickler, et al.

The OpenOximetry Repository is a structured database designed to store clinical and laboratory pulse oximetry data and allows for consolidation of data sets held by collaborating organizations. Matched or independent readings of oxygen saturations, …
Published: Feb. 28, 2025. Version: 1.1.1
Model Credentialed Access

RadVLM model

Nicolas Deperrois, Hidetoshi Matsuo, Samuel Ruiperez-Campillo, et al.

We present RadVLM, a compact (7B) multitask conversational foundation model designed for CXR interpretation. Its development relies on the curation of a large-scale instruction dataset comprising over 1 million image-instruction pairs containing bot…
Published: Oct. 8, 2025. Version: 1.0.0
Database Credentialed Access

Immunosuppressive Condition and Medication Annotations for Admission Notes in the MIMIC-III Database

Vijeeth Guggilla, Melissa Bak, Mengjia Kang, et al.

Immunosuppression due to underlying conditions or immunosuppressive medication use increases the risk of morbidity and mortality in the context of infectious disease. Identifying patients with immunosuppression is important for better studying and u…
Published: Aug. 4, 2025. Version: 1.0.0