Resources

160 results for "mimic"

Database Open Access

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, et al.

The CheXmask Database presents a comprehensive, uniformly annotated collection of chest radiographs, constructed from five public databases: ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest and VinDr-CXR. The database aggregates 657,566 anatomical seg…
Published: Jan. 22, 2025. Version: 1.0.0
Database Credentialed Access

TherLid: A Thermometry Linked Dataset

Jeremy Tan, Inês Martins, João Matos, et al.

A recent study showed that infrared (IR) sensors may be prone to calibration discrepancies among darker-pigmented patients. Similar disparities have already been verified in pulse oximetry. This raises questions about whether thermometry measurement…
Published: Jan. 21, 2025. Version: 1.0.0
Database Credentialed Access

Medical-CXR-VQA dataset: A Large-Scale LLM-Enhanced Medical Dataset for Visual Question Answering on Chest X-Ray Images

Xinyue Hu, Lin Gu, Kazuma Kobayashi, et al.

Medical Visual Question Answering (VQA) is an important task in medical multi-modal Large Language Models (LLMs), aiming to answer clinically relevant questions regarding input medical images. This technique has the potential to improve the efficien…
Published: Jan. 21, 2025. Version: 1.0.0
Database Credentialed Access

MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Benedikt Boecking, Naoto Usuyama, Shruthi Bannur, et al.

We release a new dataset, MS-CXR, with locally-aligned phrase grounding annotations by board-certified radiologists to facilitate the study of complex semantic modelling in biomedical vision–language processing. The MS-CXR dataset provides 1162 imag…
Published: Nov. 15, 2024. Version: 1.1.0
Database Credentialed Access

RadGraph2: Tracking Findings Over Time in Radiology Reports

Adam Dejl, Sameer Khanna, Patricia Therese Pile, et al.

RadGraph2 is a dataset of 800 chest radiology reports annotated using a fine-grained entity-relationship schema, which is an expanded version of the previously introduced RadGraph dataset. In contrast with the previous approaches and the original Ra…
Published: Aug. 8, 2024. Version: 1.0.0
Database Credentialed Access

EHRNoteQA: An LLM Benchmark for Real-World Clinical Practice Using Discharge Summaries

Sunjun Kweon, Jiyoun Kim, Heeyoung Kwak, et al.

Discharge summaries in Electronic Health Records (EHRs) are crucial for clinical decision-making, but their length and complexity make information extraction challenging, especially when dealing with accumulated summaries across multiple patient adm…
Published: June 26, 2024. Version: 1.0.1
Database Credentialed Access

EHR-DS-QA: A Synthetic QA Dataset Derived from Medical Discharge Summaries for Enhanced Medical Information Retrieval Systems

Konstantin Kotschenreuther

This dataset was designed and created to enable advancements in healthcare-focused large language models, particularly in the context of retrieval-augmented clinical question-answering capabilities. Developed using a self-constructed pipeline based …
Published: Jan. 11, 2024. Version: 1.0.0
Model Credentialed Access

Characterization of Stigmatizing Language in Medical Records

Keith Harrigian, Ayah Zirikly, Brant Chee, et al.

Widespread disparities in clinical outcomes exist between different demographic groups in the United States. A new line of work in medical sociology has demonstrated physicians often use stigmatizing language in electronic medical records within cer…
Published: Nov. 6, 2023. Version: 1.0.0
Database Credentialed Access

Radiology Report Expert Evaluation (ReXVal) Dataset

Feiyang Yu, Mark Endo, Rayan Krishnan, et al.

The Radiology Report Expert Evaluation (ReXVal) Dataset is a publicly available dataset of radiologist evaluations of errors in automatically generated radiology reports. The dataset contains annotations from 6 board certified radiologists on clinic…
Published: June 20, 2023. Version: 1.0.0
Database Credentialed Access

Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization

Yanjun Gao, John Caskey, Timothy Miller, et al.

Applying methods in natural language processing on electronic health records (EHR) data is a growing field. Existing corpus and annotation focus on modelling textual features and relation prediction [1] . However, there is a paucity of annotated cor…
Published: Sept. 30, 2022. Version: 1.0.0