Resources

138 results for "annotation"

Database Open Access

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Nicolas Gaggion, Candelaria Mosquera, Martina Aineseder, et al.

The CheXmask Database presents a comprehensive, uniformly annotated collection of chest radiographs, constructed from five public databases: ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest and VinDr-CXR. The database aggregates 657,566 anatomical seg…
Published: Jan. 22, 2025. Version: 1.0.0
Database Restricted Access

MIMIC-IV-Ext-DiReCT

Bowen Wang, Jiuyang Chang, Yiming Qian

Large language models (LLMs) have recently demonstrated remarkable capabilities across a broad spectrum of tasks and applications, including the medical field. Models like GPT-4 excel in medical question answering but encounter challenges in interpr…
Published: Jan. 21, 2025. Version: 1.0.0
Model Credentialed Access

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Kenneth Kehl, Pavel Trukhanov, Christopher Fong, et al.

Databases that link molecular data to clinical outcomes can inform precision cancer research into novel prognostic and predictive biomarkers. However, outside of clinical trials, cancer outcomes are typically recorded only in text form within electr…
Published: Oct. 24, 2024. Version: 1.0.0
Database Credentialed Access

Comprehensive Polysomnography (CPS) Dataset: A Resource for Sleep-Related Arousal Research

Stefan Kraft, Andreas Theissler, Vera Wienhausen-Wilke, et al.

The CPS dataset, assembled at Klinikum Esslingen, Germany, encompasses 113 diagnostic polysomnographic sleep recordings. These recordings include up to 36 raw and 23 derived data channels, alongide 81 types of annotated events for each participant, …
Published: Sept. 18, 2024. Version: 1.0.0
Database Credentialed Access

MIMIC-IV-ECG-Ext-ICD: Diagnostic labels for MIMIC-IV-ECG

Nils Strodthoff, Juan Miguel Lopez Alcaraz, Wilhelm Haverkamp

The number of publicly available ECG datasets has increased tremendously in the past few years and several of these datasets have developed into widely used benchmarking datasets. However, most of them exhibit a common limitation, namely the relianc…
Published: Aug. 30, 2024. Version: 1.0.1
Database Restricted Access

Multimodal Physiological Indices During Surgery Under Anesthesia

Sandya Subramanian, Bryan Tseng, Riccardo Barbieri, et al.

Monitoring nociception, the flow of information associated with harmful stimuli through the nervous system even during unconsciousness, is critical for proper anesthesia care during surgery. Currently, this is done by tracking heart rate and blood p…
Published: Aug. 23, 2024. Version: 1.0
Database Open Access

PADS - Parkinsons Disease Smartwatch dataset

Julian Varghese, Alexander Brenner, Lucas Plagwitz, et al.

Parkinson’s disease (PD) is the second-most common neurodegenerative disorder, while incidence and worldwide burden are further increasing. In the era of digital health transformation, smart devices and mobile sensors, including smartphones and smar…
Published: March 25, 2024. Version: 1.0.0
Database Credentialed Access

ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection

Sunjae Kwon, Xun Wang, Weisong Liu, et al.

Opioid related aberrant behaviors (ORAB) present novel risk factors for opioid overdose. Previously, ORAB have been mainly assessed by survey results and by monitoring drug administrations. Such methods however, cannot scale up and do not cover the …
Published: Jan. 11, 2024. Version: 1.0.0
Database Open Access

Kiel Cardio Database

Erik Engelhardt, Norbert Frey, Gerhard Schmidt

The Kiel Cardio Database, which includes magnetocardiography (MCG) measurements of seven healthy male volunteers, is presented in this publication. QuSpin QZFM Gen 1 sensors were used in a magnetically shielded chamber at the University of Kiel. Eac…
Published: Dec. 15, 2023. Version: 1.0.0 | Visualize waveforms
Database Credentialed Access

Medication Extraction Labels for MIMIC-IV-Note Clinical Database

Akshay Goel, Almog Gueta, Omry Gilon, et al.

This dataset release provides medication extraction labels for a subset of 600 discharge summaries from the 2023 MIMIC-IV-Note dataset. These labels are consistent with the schema from the 2009 i2b2 Workshop on NLP Challenges dataset. We utilized a …
Published: Dec. 12, 2023. Version: 1.0.0