# file: Makefile G. Moody 24 June 1989
# Last revised: 20 December 2001
# `make' description file for the WFDB Applications Guide
#
# -----------------------------------------------------------------------------
# WFDB applications: programs for working with annotated signals
# Copyright (C) 2001 George B. Moody
#
# These programs are free software; you can redistribute them and/or modify
# them under the terms of the GNU General Public License as published by the
# Free Software Foundation; either version 2 of the License, or (at your
# option) any later version.
#
# These programs are distributed in the hope that they will be useful, but
# WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or
# FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for
# more details.
#
# You should have received a copy of the GNU General Public License along with
# these programs; if not, see .
#
# You may contact the author by e-mail (wfdb@physionet.org) or postal mail
# (MIT Room E25-505A, Cambridge, MA 02139 USA). For updates to this software,
# please visit PhysioNet (http://www.physionet.org/).
# _____________________________________________________________________________
#
# This file is used with the UNIX `make' command to create and install on-line
# versions of the WFDB Applications Guide, and also to print it. Before using
# this file for the first time, check that the site-specific variables below
# are appropriate for your system.
# The WFDB Applications Guide documents the application programs provided in
# the app, convert, psd, wave (briefly), and wview subdirectories of wfdb, as
# well as the file formats supported by the WFDB Software Package. It also
# includes a tutorial on evaluation of arrhythmia and ischemia detectors using
# this software and standard databases.
# The most recent version of this guide is always available on PhysioNet
# (follow the links from http://www.physionet.org/physiotools/manuals.shtml).
# Use any web browser to read it.
# If you follow the instructions for a standard installation of the WFDB
# Software Package, the man pages from this directory will be installed so they
# can be read using 'man', 'xman', etc. The individual pages will be
# accessible to the UNIX `man' command, and to similar commands such as `xman',
# provided that MANDIR (see below) is in your MANPATH (type `man man' for
# further information).
# If you have the necessary formatting software, these man pages and the
# remainder of the WFDB Applications Guide can be produced in a wide variety of
# formats from the sources in in this directory. Here is a brief list of
# available formats and the commands needed to produce them:
# HTML 'make wag.html'(requires rman, latex2html, and perl)
# man pages 'make wag.man'
# PDF 'make wag.pdf' (requires troff, tbl, pdflatex, ps2pdf, pdftk)
# PostScript 'make wag.ps' (requires the above tools plus pdftops)
# printed copy 'make wag-book'(requires the above tools plus a printer)
# _____________________________________________________________________________
# file: version.def G. Moody 24 May 2000
# Last revised: 25 January 2018
# Each release of the WFDB Software Package is identified by a three-part
# version number, defined below. Be sure to leave a single space before
# and after the "=" in each of the next three lines!
MAJOR = 10
MINOR = 7
RELEASE = 0
VERSION = 10.7.0
# RPMRELEASE can be incremented if changes are made between official
# releases. It should be reset to 1 whenever the VERSION is changed.
RPMRELEASE = 1
# VDEFS is the set of C compiler options needed to set version number variables
# while compiling the WFDB Software Package.
VDEFS = -DWFDB_MAJOR=$(MAJOR) -DWFDB_MINOR=$(MINOR) -DWFDB_RELEASE=$(RELEASE)
# WAVEVERSION is the WAVE version number.
WAVEVERSION = 6.12
# _____________________________________________________________________________
# Definitions generated by 'configure'
PACKAGE = wfdb-10.7.0
SRCDIR = "/tmp/wfdb-10.7.0"
LONGDATE = 10 June 2022
SHORTDATE = JUNE 2022
YEAR = 2022
ARCH = x86_64-Linux
BUILD_CC = $(CC)
# _____________________________________________________________________________
# file: linux.def G. Moody 31 May 2000
# Last revised: 18 May 2022
# 'make' definitions for compiling the WFDB Software Package under Linux
# Choose a value for WFDBROOT to determine where the WFDB Software Package will
# be installed. One of the following is usually a reasonable choice.
# Installing in /usr generally requires root permissions, but will be easiest
# for future software development (no special -I or -L options will be needed
# to compile software with the WFDB library, since the *.h files and the
# library will be installed in the standard directories).
WFDBROOT = /usr/local
# Installing in /usr/local usually requires root permissions. On a multi-user
# system where it is desirable to keep the OS vendor's software separate from
# other software, this is a good choice. Another common choice in such cases
# is /opt .
# WFDBROOT = /usr/local
# To install without root permissions, a good choice is to set WFDBROOT to the
# name of your home directory, as in the example below (change as needed).
# WFDBROOT = /home/frodo
# LC and LL are used to determine C compiler and linker options needed to
# enable NETFILES (code that allows applications linked to the WFDB library to
# read input from HTTP and FTP servers, in addition to the standard filesystem
# support available without NETFILES). The WFDB library can use either
# libcurl (recommended) or libwww to provide NETFILES support. To use libcurl,
# set LC to `curl-config --cflags` (note the backquotes) and LL to
# `curl-config --libs`. Otherwise, to use libwww, set LC to
# `libwww-config --cflags` and LL to `libwww-config --libs`. If neither
# libcurl nor libwww is available, LC and LL should be empty (and NETFILES
# will be disabled).
LC = `curl-config --cflags`
LL = `curl-config --libs`
# LIBFLAC_CFLAGS and LIBFLAC_LIBS specify the set of C compiler and
# linker options needed to link with the FLAC library.
LIBFLAC_CFLAGS = `pkg-config --cflags flac`
LIBFLAC_LIBS = `pkg-config --libs flac`
# BINDIR specifies the directory in which the applications will be installed;
# it should be a directory in the PATH of those who will use the applications.
BINDIR = $(WFDBROOT)/bin
# DBDIR specifies the name of a directory in which to install the contents
# of the `data' directory.
DBDIR = $(WFDBROOT)/database
# INCDIR specifies the name of a directory in which to install the WFDB
# library's #include <...> files.
INCDIR = $(WFDBROOT)/include
# INFODIR is the GNU info directory (optional, needed to `make info').
INFODIR = $(WFDBROOT)/share/info
# LIBDIR specifies the name of a directory in which to install the WFDB
# library.
LIBDIR = $(WFDBROOT)/lib
# MANDIR is the root of the man page directory tree. On most systems, this is
# something like /usr/man or /usr/local/man (type 'man man' to find out).
MANDIR = $(WFDBROOT)/share/man
# PSPDIR specifies the name of a directory in which to install the PostScript
# prolog (*.pro) files from the 'app' directory.
PSPDIR = $(WFDBROOT)/lib/ps
# CC is the name of your C compiler.
CC = gcc
# CCDEFS is the set of C compiler options needed to set preprocessor variables
# while compiling the WFDB Software Package. CCDEFS should always include
# VDEFS (the version definitions). Under Linux, add -fno-stack-protector
# when compiling the original (SWIG-based) WFDB Toolkit for Matlab.
CCDEFS = -DWFDB_FLAC_SUPPORT $(VDEFS) -DWFDB_LARGETIME
# MFLAGS is the set of architecture-dependent (-m*) compiler options, which
# is usually empty. See the gcc manual for information about gcc's -m options.
MFLAGS =
# CFLAGS is the set of C compiler options. CFLAGS should always include
# CCDEFS.
CFLAGS = -Wno-implicit -Wformat $(MFLAGS) -g -O $(CCDEFS) $(LC) $(LIBFLAC_CFLAGS) \
-I$(DESTDIR)$(INCDIR)
# RPATHFLAGS is a set of C compiler options that cause the program to
# search for shared libraries in a non-standard location at run-time.
# These options are not needed or useful when using a static library.
RPATHFLAGS = -Wl,--enable-new-dtags,-rpath,$(LIBDIR)
# LDFLAGS is appended to the C compiler command line to specify loading the
# WFDB library.
LDFLAGS = -L$(DESTDIR)$(LIBDIR) -lwfdb $(RPATHFLAGS)
# WFDBLIB is the name of the standard WFDB library. In order to access it via
# `-lwfdb', WFDBLIB should be `libwfdb.a'.
WFDBLIB = libwfdb.a
# BUILDLIB is the command that creates the static WFDB library once its
# components have been compiled separately; the list of *.o files that
# make up the library will be appended to BUILDLIB.
BUILDLIB = $(AR) $(ARFLAGS) $(WFDBLIB)
# RANLIB is the command that builds an index of symbols in the static
# library, after it has been created by the BUILDLIB command.
RANLIB = ranlib
# PRINT is the name of the program used to produce listings (including any
# options for the desired formatting).
PRINT = lpr
# SETPERMISSIONS is the command needed to make the installed files accessible
# to those who will use them. The value given below makes them readable by
# everyone, and writeable by the owner only. (If you perform the installation
# as `root', `root' is the owner of the installed files.)
SETPERMISSIONS = chmod 644
# SETDPERMISSIONS is similarly used to make directories created during the
# installation accessible.
SETDPERMISSIONS = chmod 755
# SETLPERMISSIONS is the command needed to make the WFDB library usable by
# programs linked to it.
SETLPERMISSIONS = chmod 644
# SETXPERMISSIONS is the command needed to make the applications accessible.
SETXPERMISSIONS = chmod 755
# STRIP is the command used to compact the compiled binaries by removing their
# symbol tables.
STRIP = strip
# To retain the symbol tables for debugging, comment out the previous line, and
# uncomment the next line.
# STRIP = :
# ...........................................................................
# This section of definitions is used only when compiling WAVE, which is
# possible only if the XView and Xlib libraries and include files have been
# installed.
# OPENWINHOME specifies the root directory of the OpenWindows hierarchy.
# This is usually /usr/openwin.
OPENWINHOME = /usr/openwin
# OWINCDIR is the directory in which the `xview' directory containing XView
# *.h files is found.
OWINCDIR = $(OPENWINHOME)/include
# OWLIBDIR is the directory in which the XView library is found.
OWLIBDIR = $(OPENWINHOME)/lib
# XHOME specifies the root directory of the X11 hierarchy.
# This is usually /usr/X11R6 (or /usr/X11).
XHOME = /usr/X11R6
# XINCDIR is the directory in which the 'X11' directory containing X11 *.h
# files is found. This is usually /usr/X11R6/include, although there is often
# a link connecting /usr/include/X11 to this directory.
XINCDIR = $(XHOME)/include
# XLIBDIR is the directory in which the X11 libraries are found.
XLIBDIR = $(XHOME)/lib
# RPCINCDIR is the directory in which the 'rpc/rpc.h' file is found,
# if it is not in the default path.
RPCINCDIR = /usr/include/tirpc
# WCFLAGS is the set of C compiler options to use when compiling WAVE.
WCFLAGS = $(CFLAGS) -I$(OWINCDIR) -I$(XINCDIR) -I$(RPCINCDIR) \
-fno-stack-protector
# HELPOBJ can be set to "help.o" if you wish to recompile the XView spot help
# functions in "wave/help.c" (recommended under Linux).
HELPOBJ = help.o
# Otherwise, use the version in libxview by uncommenting the next line:
# HELPOBJ =
# WLDFLAGS is the set of loader options appended to the C compiler command line
# to specify loading the WFDB, XView, and Xlib libraries.
WLDFLAGS = $(LDFLAGS) -L$(OWLIBDIR) -L$(XLIBDIR) -lxview -lolgx -lX11
# Users of Red Hat Linux 5.0 or 5.1 (not later versions), use this instead:
# WLDFLAGS = $(LDFLAGS) -L$(XLIBDIR) $(OWLIBDIR)/libxview.a \
# $(OWLIBDIR)/libolgx.a -lX11
# This setting avoids incompatibilities with the shared (dynamic) libraries.
# ...........................................................................
# `make' (with no target specified) will be equivalent to `make all'.
make-all: all
# `make lib-post-install' should be run after installing the WFDB library.
lib-post-install:
$(RANLIB) $(DESTDIR)$(LIBDIR)/$(WFDBLIB)
lib-post-uninstall:
echo "Nothing to be done for lib-post-uninstall"
# _____________________________________________________________________________
# file: Makefile.tpl G. Moody 24 May 2000
# Last revised: 7 December 2017
# Change the settings below as appropriate for your setup.
# D2PARGS is a list of options for dvips. Uncomment one of these to set the
# paper size ("a4" is most common except in the US and Canada):
# D2PARGS = -t a4
D2PARGS = -t letter
# LN is a command that makes the file named by its first argument accessible
# via the name given in its second argument. If your system supports symbolic
# links, uncomment the next line.
LN = ln -sf
# Otherwise uncomment the next line if your system supports hard links.
# LN = ln
# If your system doesn't support links at all, copy files instead.
# LN = cp
# MAN1, MAN3, MAN5, and MAN7 are the directories in which local man pages for
# section 1 (commands), section 3 (libraries), section 5 (formats), and
# section 7 (conventions and miscellany) go. You may wish to use
# $(MANDIR)/manl for all of these; if so, uncomment the next four lines.
# MAN1 = $(DESTDIR)$(MANDIR)/manl
# MAN3 = $(DESTDIR)$(MANDIR)/manl
# MAN5 = $(DESTDIR)$(MANDIR)/manl
# MAN7 = $(DESTDIR)$(MANDIR)/manl
# Uncomment the next four lines to put the man pages in with the standard
# ones.
MAN1 = $(DESTDIR)$(MANDIR)/man1
MAN3 = $(DESTDIR)$(MANDIR)/man3
MAN5 = $(DESTDIR)$(MANDIR)/man5
MAN7 = $(DESTDIR)$(MANDIR)/man7
# If you want to put the man pages somewhere else, edit 'maninst.sh' first.
# PSPRINT is the name of the program that prints PostScript files. If your
# printer is not a PostScript printer, see the GhostScript documentation to see
# how to do this (since the figure files are in PostScript form, it is not
# sufficient to use a non-PostScript dvi translator such as dvilj).
PSPRINT = lpr
# TROFF is the name of the program that formats UNIX troff files (needed to
# 'make ag' and for the covers of the guides). Use 'groff' if you have
# GNU groff (the preferred formatter).
TROFF = groff
# Use 'ptroff' if you have Adobe TranScript software.
# TROFF = ptroff
# Consult your system administrator if you have neither 'groff' nor 'ptroff'.
# Other (untested) possibilities are 'psroff', 'ditroff', 'nroff', and 'troff'.
# TMAN is the TROFF option needed to load the 'man' macro package. This should
# not need to be changed unless your system is non-standard; see the file
# 'tmac.dif' for comments on a page-numbering bug in some versions of the 'man'
# package.
# TMAN = -man
# Use the alternate definition below to get consecutively numbered pages using
# GNU groff. Omit -rD1 if the final document will be printed on only one side
# of each page.
TMAN = -rC1 -rD1 -man
# PDFPS converts a PDF file to a PostScript file. Use either of these:
# PDFPS = pdf2ps
PDFPS = pdftops
# PSPDF converts a PostScript file to a PDF file.
PSPDF = ps2pdf
# It should not be necessary to modify anything below this line.
# -----------------------------------------------------------------------------
all: wag.html wag.pdf
cp -p wag.pdf ../wag
install: wag.man
collect:
$(MAKE) MANDIR=/tmp/wfdb/$(MANDIR) install
uninstall:
../../uninstall.sh $(MAN1) *.1 ad2m.1 ahaconvert.1 ahaecg2mit.1 \
ann2rr.1 m2a.1 md2a.1 hrlomb.1 hrmem.1 hrplot.1 plot3d.1 cshsetwfdb.1 \
rr2ann.1 gqpost.1 mit2edf.1 mit2wav.1 pNNx.1
../../uninstall.sh $(MAN3) *.3
../../uninstall.sh $(MAN5) *.5
../../uninstall.sh $(MAN7) *.7
rm -f ../wag/*
# 'make wag-book': print a copy of the WFDB Applications Guide
wag-book: wag.ps
cp wag.cover wagcover
echo $(SHORTDATE) >>wagcover
echo .bp >>wagcover
$(TROFF) wagcover >wagcover.ps
$(PSPRINT) wagcover.ps
$(PSPRINT) wag.ps
# 'make wag.html': format the WFDB Applications Guide as HTML
wag.html:
cp -p ../misc/icons/* fixag.sh fixag.sed ../wag
./manhtml.sh ../wag *.1 *.3 *.5 *.7
cp -p install0.tex install.tex
cp -p eval0.tex eval.tex
latex2html -init_file ./.latex2html-init \
-dir ../wag -local_icons -prefix in \
-up_url="wag.htm" -up_title="WFDB Applications Guide" install
latex2html -init_file ./.latex2html-init \
-dir ../wag -local_icons -prefix ev \
-up_url="wag.htm" -up_title="WFDB Applications Guide" eval
rm -f install.tex eval.tex
cd ../wag; rm -f index.html WARNINGS *.aux *.log *.tex
sed "s/LONGDATE/$(LONGDATE)/" ../wag/intro.htm
sed "s/LONGDATE/$(LONGDATE)/" ../wag/faq.htm
cd ../wag; ./fixag.sh "$(LONGDATE)" *.html; rm -f fixag.sh images.*
cd ../wag; rm -f .I* .ORIG_MAP *.html *.pl fixag.sed
./maketoc-html.sh | \
sed "s/LONGDATE/$(LONGDATE)/" | \
sed "s/VERSION/$(VERSION)/" >../wag/wag.htm
cd ../wag; ln -s wag.htm index.html
# 'make wag.man': install the man pages from the WFDB Applications Guide
wag.man:
test -d $(MAN1) || ( mkdir -p $(MAN1); $(SETDPERMISSIONS) $(MAN1) )
test -d $(MAN3) || ( mkdir -p $(MAN3); $(SETDPERMISSIONS) $(MAN3) )
test -d $(MAN5) || ( mkdir -p $(MAN5); $(SETDPERMISSIONS) $(MAN5) )
test -d $(MAN7) || ( mkdir -p $(MAN7); $(SETDPERMISSIONS) $(MAN7) )
./maninst.sh $(MAN1) $(MAN3) $(MAN5) $(MAN7) "$(SETPERMISSIONS)"
cd $(MAN1); $(LN) a2m.1 ad2m.1
cd $(MAN1); $(LN) a2m.1 ahaconvert.1
cd $(MAN1); $(LN) a2m.1 ahaecg2mit.1
cd $(MAN1); $(LN) a2m.1 m2a.1
cd $(MAN1); $(LN) a2m.1 md2a.1
cd $(MAN1); $(LN) ann2rr.1 rr2ann.1
cd $(MAN1); $(LN) edf2mit.1 mit2edf.1
cd $(MAN1); $(LN) gqrs.1 gqpost.1
cd $(MAN1); $(LN) hrfft.1 hrlomb.1
cd $(MAN1); $(LN) hrfft.1 hrmem.1
cd $(MAN1); $(LN) hrfft.1 hrplot.1
cd $(MAN1); $(LN) plot2d.1 plot3d.1
cd $(MAN1); $(LN) pnnlist.1 pNNx.1
cd $(MAN1); $(LN) setwfdb.1 cshsetwfdb.1
cd $(MAN1); $(LN) wav2mit.1 mit2wav.1
# 'make wag.ps': format the WFDB Applications Guide as PostScript
wag.ps: wag.pdf
$(PDFPS) wag.pdf
# 'make wag.pdf': format the WFDB Applications Guide as PDF
wag.pdf: wag.tex
$(MAKE) wag1.pdf # also makes wag2.pdf, wag3.pdf, wag4.pdf
pdftk wag[1234].pdf cat output wag.pdf # concatenate sections
$(SETPERMISSIONS) wag.pdf
wag1.pdf: wag2.pdf
$(MAKE) getpagenos maketoclines
./maketoc-tex.sh >wag1.toc # TOC, wag3.pdf, wag4.pdf
sed 's/VERSION/$(VERSION)/' wag1.tex
pdflatex '\nonstopmode\input{wag1}' # front matter
wag2.pdf:
tbl *.1 *.3 *.5 | $(TROFF) $(TMAN) >wag2.ps # man pages
$(PSPDF) wag2.ps wag2.pdf
wag3.pdf: install.tex
sed "s/LONGDATE/$(LONGDATE)/" wag3.tex
pdflatex '\nonstopmode\input{wag3}'
wag4.pdf: eval.tex
sed "s/LONGDATE/$(LONGDATE)/" wag4.tex
pdflatex '\nonstopmode\input{wag4}'
getpagenos: getpagenos.c
$(BUILD_CC) -o getpagenos -O getpagenos.c
maketoclines: maketoclines.c
$(BUILD_CC) -o maketoclines -O maketoclines.c
# 'make clean': remove intermediate and backup files
clean:
rm -f *.aux *.dvi *.log *.ps *.toc intro.htm faq.htm wag*pdf wagcover \
eval.tex install.tex wag[1234].tex *~