Resources
Challenge Credentialed Access
MIT Critical Datathon 2023: a MIMIC-IV Derived Dataset for Pulse Oximetry Correction Models
João Matos, Tristan Struja, David S Restrepo, Luis Filipe Nakayama, Jack Gallifant, Luca Weishaupt, Nikita Mullangi, Maria Loureiro, Skyler Shapiro, Adrien Carrel, Leo Anthony Celi
machine learning health equity pulse oximetry
Published: May 8, 2023. Version: 1.0.0
Software Open Access
PhysioTag: An Open-Source Platform for Collaborative Annotation of Physiological Waveforms
Lucas McCullum, Benjamin Moody, Hasan Saeed, Tom Pollard, Xavier Borrat Frigola, Li-wei Lehman, Roger Mark
Published: April 25, 2023. Version: 1.0.0
Database Credentialed Access
A Brazilian Multilabel Ophthalmological Dataset (BRSET)
Luis Filipe Nakayama, Mariana Goncalves, Lucas Zago Ribeiro, Helen Santos, Daniel Ferraz, Fernando Malerbi, Leo Anthony Celi, Caio Regatieri
Published: March 8, 2023. Version: 1.0.0
Database Credentialed Access
Annotation dataset of problematic opioid use and related contexts from MIMIC-III Critical Care Database discharge summaries
Melissa Poulsen, Vanessa Troiani, Philip Freda, Danielle Mowery, Anahita Davoudi
natural language processing opioid use disorder clinical notes substance use
Published: Feb. 8, 2023. Version: 1.0.0
Database Open Access
MIMIC-IV-ED Demo
Alistair Johnson, Lucas Bulgarelli, Tom Pollard, Leo Anthony Celi, Steven Horng, Roger Mark
Published: Feb. 8, 2023. Version: 2.2
Database Credentialed Access
MIMIC-IV-Note: Deidentified free-text clinical notes
Alistair Johnson, Tom Pollard, Steven Horng, Leo Anthony Celi, Roger Mark
deidentification mimic critical care natural language processing clinical notes electronic health record
Published: Jan. 6, 2023. Version: 2.2
Database Credentialed Access
RadQA: A Question Answering Dataset to Improve Comprehension of Radiology Reports
Sarvesh Soni, Kirk Roberts
electronic health records clinical notes question answering radiology reports machine reading comprehension
Published: Dec. 9, 2022. Version: 1.0.0
Database Credentialed Access
CXR-PRO: MIMIC-CXR with Prior References Omitted
Vignav Ramesh, Nathan Chi, Pranav Rajpurkar
generation free-text radiology reports references to priors retrieval large language models
Published: Nov. 23, 2022. Version: 1.0.0
Database Open Access
PTB-XL, a large publicly available electrocardiography dataset
Patrick Wagner, Nils Strodthoff, Ralf-Dieter Bousseljot, Wojciech Samek, Tobias Schaeffter
electrocardiography ptb-xl ptb ecg
Published: Nov. 9, 2022. Version: 1.0.3
Visualize waveformsDatabase Credentialed Access
Tasks 1 and 3 from Progress Note Understanding Suite of Tasks: SOAP Note Tagging and Problem List Summarization
Yanjun Gao, John Caskey, Timothy Miller, Brihat Sharma, Matthew Churpek, Dmitriy Dligach, Majid Afshar
Published: Sept. 30, 2022. Version: 1.0.0